DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trm7-32 and AT5G01230

DIOPT Version :10

Sequence 1:NP_650590.1 Gene:Trm7-32 / 42056 FlyBaseID:FBgn0038471 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_851026.1 Gene:AT5G01230 / 830268 AraportID:AT5G01230 Length:309 Species:Arabidopsis thaliana


Alignment Length:304 Identity:154/304 - (50%)
Similarity:194/304 - (63%) Gaps:53/304 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKTSKDKRDIYYRQAKDEGWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKLY- 64
            |||.|:||||||||:||:||||||||||||.:||.:.|..||:|.||||||||||||||||:|| 
plant     1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRQLYL 65

  Fly    65 ---DTCETDDEKSAVKIIAVDLQAMAPIRGILQLQGDITKQSTAEAIIGHFGGNEKAQLVVCDGA 126
               .:.|:.|....: |:|:|||.||||.|::|:|||||...|||.:|.||.|. ||.|||||||
plant    66 PAKSSAESKDGDLPL-IVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGC-KADLVVCDGA 128

  Fly   127 PDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSSQMQIFFKKFDIYKPP 191
            |||||:|:|||::|.||::|.|:|.|.:|:.||.|:||||:|..||||..|:::||......||.
plant   129 PDVTGLHDMDEFVQSQLILAGLTIVTHILKEGGKFIAKIFRGKDTSLLYCQLKLFFPTVTFAKPK 193

  Fly   192 SSRPSSIEAFVVCSDFCLPEGYIPQVINPARDDIRLLAQKTGSE---------------VNRRLV 241
            |||.||||||.||.::..|||:.|:       |:..|.:|.||.               .|:..:
plant   194 SSRNSSIEAFAVCENYSPPEGFNPR-------DLHRLLEKVGSPSGGSDLDCSSGWLEGPNKVYI 251

  Fly   242 PFIACGDLNGLSDPEEGKTSSSDESKSNLEYVYDAVMDDASYPL 285
            ||:|||||.|                      ||:   |.||||
plant   252 PFLACGDLTG----------------------YDS---DRSYPL 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trm7-32NP_650590.1 RlmE 1..207 CDD:440062 129/209 (62%)
AT5G01230NP_851026.1 RlmE 6..209 CDD:440062 125/204 (61%)

Return to query results.
Submit another query.