DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trm7-32 and Ftsj3

DIOPT Version :10

Sequence 1:NP_650590.1 Gene:Trm7-32 / 42056 FlyBaseID:FBgn0038471 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001012014.1 Gene:Ftsj3 / 303608 RGDID:1307110 Length:829 Species:Rattus norvegicus


Alignment Length:253 Identity:84/253 - (33%)
Similarity:126/253 - (49%) Gaps:16/253 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GKTSKDKRDIYYRQAKDEGWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKLYDT 66
            ||..|.:||.:|..||:.|:|:||||||:.::..:..|...:..:|||||||.|.||.::.:   
  Rat     5 GKVGKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFM--- 66

  Fly    67 CETDDEKSAVKIIAVDLQAMAPIRGILQLQGDITKQSTAEAIIGHFGGNEKAQLVVCDGAPDVTG 131
                  ..:..|:.|||..:.|:..::.||.|||.:...:|:.... ...|..:|:.||||:|..
  Rat    67 ------PVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKEL-KTWKVDVVLNDGAPNVGA 124

  Fly   132 VHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSSQMQIFFKKFDIYKPPSSRPS 196
            ....|.|.|..|.:.||.:|...|..||.|:.|:|:......|....|..|.:....||.:||..
  Rat   125 SWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFHRVQATKPQASRHE 189

  Fly   197 SIEAFVVCSDFCLPEGYIPQVINP--ARDDIRLLAQKTGSEVNRRLVP---FIACGDL 249
            |.|.||||..|..|:....:..:|  |..::.:.| ||.:|:..:..|   ..|.|||
  Rat   190 SAEIFVVCQGFLAPDKVDAKFFDPKFAFKEVEVQA-KTVTELVTKKKPKAEGYAEGDL 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trm7-32NP_650590.1 RlmE 1..207 CDD:440062 71/204 (35%)
Ftsj3NP_001012014.1 RlmE 1..200 CDD:440062 71/204 (35%)
DUF3381 231..397 CDD:463375 5/16 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 332..367
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 443..508
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 528..634
Spb1_C 632..823 CDD:462264
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 794..829
Blue background indicates that the domain is not in the aligned region.

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