DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5225 and col-105

DIOPT Version :8

Sequence 1:NP_650587.1 Gene:CG5225 / 42053 FlyBaseID:FBgn0038468 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_500071.1 Gene:col-105 / 186529 WormBaseID:WBGene00000679 Length:290 Species:Caenorhabditis elegans

Alignment Length:267 Identity:80/268 (30%)
Similarity:91/268 (34%) Gaps:95/268 (35%)


  Fly    33 LQAAPAPA-----PAQSVIYKLPPQHYYPPPPPPPPPPPQH-CNCPPGPPGPPGPPGLPGTPGPQ 91
            :|.||.|.     |.:      |.:...|..|..|..|||. |.....||..|.|.|.||.||||
 Worm    92 IQGAPGPTGEPGRPGR------PGKPGVPGMPGNPGKPPQQPCELVTPPPCSPCPAGPPGKPGPQ 150

  Fly    92 GPKGHTGSKGERGEKGERGHYGLPGQPGEPGPIGPPGLPGPPGHKSGHGHHDHHDHHHHHPAPPP 156
            |..|..|..|..||:      |:.|:||.|||.||||.||.||.:...|                
 Worm   151 GAPGDIGQPGNPGER------GMDGEPGPPGPTGPPGEPGLPGAQGITG---------------- 193

  Fly   157 PPPPPPPPPPPPPPPHSHPHSHHPHPPIVTPPIIVPIPLPPQKGEHGHHHHHKGSKGPPGPPGPP 221
                                    .|.:...|:.                :..|:.||||.||||
 Worm   194 ------------------------QPGVNAEPVA----------------YRAGAPGPPGEPGPP 218

  Fly   222 GT-GPPGPPGPPGTTYPQPPPPPPPPPPPPPSYPYPPYPYPPPGPYPGPWIPLPVPVPWPSKGHK 285
            |. |.||..|..|       ||..|.|..||.....|....|||....|             |..
 Worm   219 GAHGDPGDLGEEG-------PPGLPGPKGPPGASGIPGNDGPPGARGQP-------------GLS 263

  Fly   286 GDKGHKG 292
            ||.|.||
 Worm   264 GDSGEKG 270

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG5225NP_650587.1 None
col-105NP_500071.1 Col_cuticle_N 10..62 CDD:198156
Collagen 93..>123 CDD:189968 9/36 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR24023
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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