DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5225 and Cited4

DIOPT Version :8

Sequence 1:NP_650587.1 Gene:CG5225 / 42053 FlyBaseID:FBgn0038468 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_446151.1 Gene:Cited4 / 114491 RGDID:620113 Length:179 Species:Rattus norvegicus

Alignment Length:113 Identity:39/114 (34%)
Similarity:43/114 (38%) Gaps:22/114 (19%)


  Fly   150 HHPAPPPPPPPP-------PPPPP--PPPPPHSHPHSHHPHPPIVTPPIIVPIPLPPQKGEHGHH 205
            |.|....|.|.|       |...|  ||||..:..:.....|....|   .|:..||..|     
  Rat    18 HAPRTLQPYPGPGLDSGLRPRGAPLGPPPPSGTLAYGSFGSPVSFQP---FPVSQPPGAG----- 74

  Fly   206 HHHKGSKGPPGP---PGPP-GTGPPGPPGP-PGTTYPQPPPPPPPPPP 248
            :.|..|...|.|   |.|| ..|.|.|..| ||...|.|.|||||.||
  Rat    75 NAHLQSAATPSPGRMPAPPSAAGGPSPLQPAPGAASPLPLPPPPPLPP 122

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG5225NP_650587.1 None
Cited4NP_446151.1 CITED 1..179 CDD:282356 39/114 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_2CMI8
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.