DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3534 and lyxK

DIOPT Version :10

Sequence 1:NP_650582.1 Gene:CG3534 / 42047 FlyBaseID:FBgn0038463 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_418037.1 Gene:lyxK / 948101 ECOCYCID:EG12284 Length:498 Species:Escherichia coli


Alignment Length:329 Identity:64/329 - (19%)
Similarity:110/329 - (33%) Gaps:98/329 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 SSWLTISMGTSDTLMMSLKEPLNW----EEGHILCHPTETEEFMGLLCFRNASLVREEMNKKTTG 354
            |:...:|:|..|..:      .:|    |..|.|.....:.|..|.:..:.|:|...:......|
E. coli   181 SNLYNMSLGEYDPCL------TDWLGIAEINHALPPVVGSAEICGEITAQTAALTGLKAGTPVVG 239

  Fly   355 GDWDKFNEYL------DSTPRGNFGNMAV--------------------HFNDMEII-----PKA 388
            |.:|..:..|      :.|.....|..||                    :.||.|.|     |.:
E. coli   240 GLFDVVSTALCAGIEDEFTLNAVMGTWAVTSGITRGLRDGEAHPYVYGRYVNDGEFIVHEASPTS 304

  Fly   389 QGILRW-------------NREMDPSSPDAARGVIKF------SSPQIE---------------- 418
            .|.|.|             |:.:  :|...|.|.:.|      |:..:|                
E. coli   305 SGNLEWFTAQWGEISFDEINQAV--ASLPKAGGDLFFLPFLYGSNAGLEMTSGFYGMQAIHTRAH 367

  Fly   419 -IRALVEGQMLHHRAVAEDLGYKFGPETQILVTGGASVNKSILQTIADVFNAPV---HIQDEG-F 478
             ::|:.||.:..|......:..:|.....:.||||.:.:...:|.:|||....:   .:::.| |
E. coli   368 LLQAIYEGVVFSHMTHLNRMRERFTDVHTLRVTGGPAHSDVWMQMLADVSGLRIELPQVEETGCF 432

  Fly   479 EAALLGAAYRSAYALYLQEAGDGVTPLCYRDYILSLTSNKLSLVCEPHKDSEEIYAPMLQRYREM 543
            .|||........|..:.:...|...|:  |..:..:|:::|             |....|||:.:
E. coli   433 GAALAARVGTGVYHNFSEAQRDLRHPV--RTLLPDMTAHQL-------------YQKKYQRYQHL 482

  Fly   544 ARVL 547
            ...|
E. coli   483 IAAL 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3534NP_650582.1 ASKHA_NBD_FGGY_SpXK-like 11..539 CDD:466795 60/319 (19%)
lyxKNP_418037.1 ASKHA_NBD_FGGY_EcLyxK-like 4..443 CDD:466805 53/269 (20%)

Return to query results.
Submit another query.