DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3534 and fucK

DIOPT Version :10

Sequence 1:NP_650582.1 Gene:CG3534 / 42047 FlyBaseID:FBgn0038463 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_417283.2 Gene:fucK / 946022 ECOCYCID:EG10350 Length:472 Species:Escherichia coli


Alignment Length:548 Identity:102/548 - (18%)
Similarity:187/548 - (34%) Gaps:172/548 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KRTFLGFDLSTQKLKAVLLGSSLEVVAAAEVKFDTDLPEFRTTGGANAGSIKNEYFVQPVMWVKA 72
            :...|..|.....::|:.:....::||.|            :|..|:..:::|..:.|   |  :
E. coli     3 QEVILVLDCGATNVRAIAVNRQGKIVARA------------STPNASDIAMENNTWHQ---W--S 50

  Fly    73 MDIVLDRLV----MQQADLS---------TVAAISGS--GQQHGSLY----W----SKHGINTLQ 114
            :|.:|.|..    ...::|:         |...:.|:  .:|...||    |    :...::.::
E. coli    51 LDAILQRFADCCRQINSELTECHIRGIAVTTFGVDGALVDKQGNLLYPIISWKCPRTAAVMDNIE 115

  Fly   115 NLDSEKFLHAQIDDSAFVVNR--TPIWMDATTTKQCLEMEMAVGGKLNMVELTGSKCYERFTGPQ 177
            .|.|.:.|.|.....||..|.  ..:|:                               :...||
E. coli   116 RLISAQRLQAISGVGAFSFNTLYKLVWL-------------------------------KENHPQ 149

  Fly   178 IRKIYQQRCHAYEEANRISLVSSFISSLFLGSVAPIDFSDGSGMNLLDIRKKNWSKECLNVCAPD 242
            :    .:|.||:      ..:||.|:....|... .|.:......:|||:::::|.:.|.  |..
E. coli   150 L----LERAHAW------LFISSLINHRLTGEFT-TDITMAGTSQMLDIQQRDFSPQILQ--ATG 201

  Fly   243 LDKRLDIP--VSPNSILGNVSPYFVERFSFSPDCKVAASTGDNPSALSGMLVGSSWLTISMGTSD 305
            :.:|| .|  |.....:|.:...............|.::..|...||.|.....:...:|.||  
E. coli   202 IPRRL-FPRLVEAGEQIGTLQNSAAAMLGLPVGIPVISAGHDTQFALFGAGAEQNEPVLSSGT-- 263

  Fly   306 TLMMSLKEPLNWEEGHILCHPTETEEFMGLLCFRNASLVREEMNKKTTGGDWDKFNEYLDSTPRG 370
                       ||                :|..|:|.:            |....::|..||  .
E. coli   264 -----------WE----------------ILMVRSAQV------------DTSLLSQYAGST--C 287

  Fly   371 NFGNMAVHFN-DMEIIPKAQGILRWNREM--DPSSP-----DAAR-------------------- 407
            ...:.|..:| .|:.:  |.|:|.|.|::  ...:|     :.||                    
E. coli   288 ELDSQAGLYNPGMQWL--ASGVLEWVRKLFWTAETPWQMLIEEARLIAPGADGVKMQCDLLSCQN 350

  Fly   408 ----GVIKFSSPQIEIRALVEG---QMLHHRAVAEDLGYKFGPETQILVTGGASVNKSILQTIAD 465
                ||...::.....||.:||   |:..:..:.|.:|:  ...:::|:.||.|.|....|..|:
E. coli   351 AGWQGVTLNTTRGHFYRAALEGLTAQLQRNLQMLEKIGH--FKASELLLVGGGSRNTLWNQIKAN 413

  Fly   466 VFNAPVHIQDEGFEAALLGAAYRSAYAL 493
            :.:.||.:.|:. |..:.|||....|.:
E. coli   414 MLDIPVKVLDDA-ETTVAGAALFGWYGV 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3534NP_650582.1 ASKHA_NBD_FGGY_SpXK-like 11..539 CDD:466795 102/545 (19%)
fucKNP_417283.2 PRK10331 3..472 CDD:182383 102/548 (19%)

Return to query results.
Submit another query.