Protein Alignment abd-A and ro

DIOPT Version :10

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Alignment Length: 371
• Identity: 95/371 - (25%)
• Similarity: 134/371 - (36%)
• Gaps: 110/371 - (29%)

  Fly   221 DNSPGSASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHG------------ 273
            |.|||...:.:....|::...:.....::....|    .::|.::....|.:|
  Fly    12 DGSPGIKRSDSLDPIANTTILSVPQRPSSPRQFF----ERLYGHLETRSSENGEIDVGTHAHKPP 72

  Fly   274 ---------GLSGMAGFTGLEDKSCSRYTDTVMNSY-QSMSVPASASAQFAQFYQHATAAASAVS 328
                     |.|..:....:.|:..|.......:.| .:...|...|.|..|.:.|.......|.
  Fly    73 PCDTPYHSDGGSVSSPDISISDERTSLAAYPAYDFYGHAKDYPQHPSQQHQQHHHHHHHPPQLVH 137

  Fly   329 AASAGAIGVDSLGNACTQPASGVM-PGAGGAGGAGIADLPR-YPWMTLTDWMGSPFERVVCGDFN 391
                             |..|.|. |.|..||||....||. :|       .|.|.:......|:
  Fly   138 -----------------QKLSYVSPPPAIAAGGAANPVLPHAFP-------AGFPSDPHFSAGFS 178

  Fly   392 GPNGCPRRR-GRQ-----TYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRR 450
            ......||: |||     |::..|||.||.|||.|.|::|.||.|:|..|.|||.||||||||||
  Fly   179 AFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRR 243

  Fly   451 MKLKKELRAVKEINEQARRDREEQEKMKAQETMKS------------------------------ 485
            .|.|:        .|:|:.|:..:..:.|...|.|
  Fly   244 AKDKR--------IEKAQIDQHYRNFVVANGFMSSIMGQAATTMPPGGVTGGVAVGVGLNYYAAA 300

  Fly   486 ------AQQNKQ--------VQQQQQQQQQQQQQQQQQHQQQQQQP 517
                  .:.|.|        .|.|:||||:||||||||.:::...|
  Fly   301 ATPAALPKDNTQDANFIDIDDQFQRQQQQKQQQQQQQQRRRETTTP 346

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeodomain	399..455	CDD:459649	35/61 (57%)
		Abdominal-A	456..478	CDD:403567	3/21 (14%)
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	31/51 (61%)