DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and HOXD12

DIOPT Version :10

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_067016.3 Gene:HOXD12 / 3238 HGNCID:5135 Length:270 Species:Homo sapiens


Alignment Length:271 Identity:69/271 - (25%)
Similarity:108/271 - (39%) Gaps:93/271 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 SAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNH-------PSSHGGLSGMAGF------TGLE 285
            :|..:..|.|..|.|.|...|:      .||::..       |::..|....|.|      .|.|
Human    52 AATPASCAPAQPAGATAFGGFS------QPYLAGSGPLGLQPPTAKDGPEEQAKFYAPEAAAGPE 110

  Fly   286 DKSCSRYTDTVMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASG 350
            ::..:|              |:.|.         .::.|.||:|..|.......:|.| |..::.
Human   111 ERGRTR--------------PSFAP---------ESSLAPAVAALKAAKYDYAGVGRA-TPGSTT 151

  Fly   351 VMPGAGGAGG-----------------AGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCP- 397
            ::.||..|.|                 ||:|...| |.:                    |:|.| 
Human   152 LLQGAPCAPGFKDDTKGPLNLNMTVQAAGVASCLR-PSL--------------------PDGLPW 195

  Fly   398 ------RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 456
                  .|:.|:.||:.|..|||.||..|.::.|::|.|:::.|.|:::|:||||||||||.|:.
Human   196 GAAPGRARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKRV 260

  Fly   457 LRAVKEINEQA 467
            :     :.|||
Human   261 V-----LREQA 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeodomain 399..455 CDD:459649 27/55 (49%)
Abdominal-A 456..478 CDD:403567 3/12 (25%)
HOXD12NP_067016.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 102..122 5/42 (12%)
Homeodomain 203..259 CDD:459649 27/55 (49%)

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