DRSC/TRiP Functional Genomics Resources

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Protein Alignment modSP and CG11842

DIOPT Version :10

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_651662.1 Gene:CG11842 / 43431 FlyBaseID:FBgn0039629 Length:319 Species:Drosophila melanogaster


Alignment Length:243 Identity:59/243 - (24%)
Similarity:86/243 - (35%) Gaps:86/243 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   359 GQLATPIKQFSSG---GYTINNTVVPWHVGLYVWHNEKDYHFQCGGSLLTPDLVITAAHCVYD-E 419
            |..|.| |:|...   |:...|..|.|.               |||:|::...|:|||||.|. :
  Fly    76 GGPAVP-KEFPHAARLGHKDENGEVEWF---------------CGGTLISDRHVLTAAHCHYSPQ 124

  Fly   420 GTRLPYSYDTFRVIAAKFYRNYGETTPEEKRRDVRLIEIAPGYKGRTENY---YQDLALLTLDEP 481
            |     |.:..|:...:|..|..:..||:  .||:.....|.:     :|   |.|::::.|..|
  Fly   125 G-----SVNIARLGDLEFDTNNDDADPED--FDVKDFTAHPEF-----SYPAIYNDISVVRLSRP 177

  Fly   482 FELSHVIRPICVTFASFAEKESVTDDVQGKFA------GWNIENKHELQFVPAVSKS-------- 532
            ...:....|.|:.|          ||  |:..      ||.     :|:.||.....        
  Fly   178 VTFNDYKHPACLPF----------DD--GRLGTSFIAIGWG-----QLEIVPRTENKKLQKVKLY 225

  Fly   533 --NSVCRRNLRDIQADK-------------FCIFTQGKSLACQGDSGG 565
              .:.||     |.||:             .||.:......|.|||||
  Fly   226 NYGTRCR-----ITADRNDELPEGYNATTQLCIGSNEHKDTCNGDSGG 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 54/231 (23%)
CG11842NP_651662.1 Tryp_SPc 73..315 CDD:238113 59/243 (24%)
Blue background indicates that the domain is not in the aligned region.

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