DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment modSP and Jon66Ci

DIOPT Version :10

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_729372.1 Gene:Jon66Ci / 38952 FlyBaseID:FBgn0035886 Length:260 Species:Drosophila melanogaster


Alignment Length:233 Identity:48/233 - (20%)
Similarity:73/233 - (31%) Gaps:96/233 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   370 SGGYTINNTVVPWHVGLYV----WHNEKDYHFQCGGSLLTPDLVITAAHCVYDEGTRLPYSYDTF 430
            :.||.......|:.|||..    |         ||||:::.:.|:||.||:..:...: |...|:
  Fly    38 TNGYPAEEGKAPYTVGLGFSGGWW---------CGGSIISNEWVLTAEHCIGGDAVTV-YFGATW 92

  Fly   431 RV-------IAAKFYRNYGETTPEEKRRDVRLIEI-------------APGYKGRTENYYQDLAL 475
            |.       :.:..:..:|..       |:.||.|             .|.|..|..:|.:..|:
  Fly    93 RTNAQFTHWVGSGNFITHGSA-------DIALIRIPHVDFWHMVNKVELPSYNDRYNDYNEWWAV 150

  Fly   476 L-----TLD--------EPFELSHVIRPICVTFASFAEKESVTDDVQGKFAGWNIENKHELQFVP 527
            .     |.|        :..:|..:....|   ||:....:|.|                     
  Fly   151 ACGWGGTYDGSPLPDYLQCVDLQIIHNSEC---ASYYGTGTVGD--------------------- 191

  Fly   528 AVSKSNSVCRRNLRDIQADKFCIFTQGKSLACQGDSGG 565
                 |.:|.|            ...||. .|.|||||
  Fly   192 -----NIICVR------------VVDGKG-TCGGDSGG 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 48/232 (21%)
Jon66CiNP_729372.1 Tryp_SPc 36..251 CDD:214473 48/233 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.