DRSC/TRiP Functional Genomics Resources

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Protein Alignment modSP and Jon25Bi

DIOPT Version :10

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_001033873.1 Gene:Jon25Bi / 33708 FlyBaseID:FBgn0020906 Length:266 Species:Drosophila melanogaster


Alignment Length:239 Identity:57/239 - (23%)
Similarity:84/239 - (35%) Gaps:70/239 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 GYTINNTVVPWHVGLYVWHNEKDYHFQCGGSLLTPDLVITAAHC--------VYDEGTRLPYSYD 428
            ||.......|:.|||....|.   .:.||||::..|.|:|||||        :|...|....:..
  Fly    40 GYPAYEGKAPYTVGLGFSGNG---GWWCGGSIIAHDWVLTAAHCTNGASQVTIYYGATWRTNAQF 101

  Fly   429 TFRVIAAKFYRNYGETTPEEKRRDVRLIEIAPGYKGRTENYYQDLALLTLDEPFELSHVIRPICV 493
            |..|.:..|.:|:  ..|.:...|:.||        ||.:             .:..|::..  |
  Fly   102 THTVGSGDFIQNH--NWPNQNGNDIALI--------RTPH-------------VDFWHMVNK--V 141

  Fly   494 TFASFAEKESVTDDVQGKFAGWNIENKH---------ELQFVPAVSKSNSVCRRNLRDIQADKFC 549
            ...||.::.::.|:......||.:....         :||.:     |||.|.|..........|
  Fly   142 ELPSFNDRYNMYDNYWAVACGWGLTTAGSQPDWMECVDLQII-----SNSECSRTYGTQPDGILC 201

  Fly   550 IFTQGKSLACQGDSGG--------------------GFTSELPT 573
            :.|.|....|.|||||                    |.|:.||:
  Fly   202 VSTSGGKSTCSGDSGGPLVLHDGGRLVGVTSWVSGNGCTAGLPS 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 57/239 (24%)
Jon25BiNP_001033873.1 Tryp_SPc 36..257 CDD:214473 57/239 (24%)
Blue background indicates that the domain is not in the aligned region.

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