DRSC/TRiP Functional Genomics Resources

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Protein Alignment modSP and Jon25Biii

DIOPT Version :10

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_608881.1 Gene:Jon25Biii / 33706 FlyBaseID:FBgn0031653 Length:258 Species:Drosophila melanogaster


Alignment Length:232 Identity:57/232 - (24%)
Similarity:79/232 - (34%) Gaps:79/232 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   362 ATPIKQFSSGGYTINNTVVPWHVGLYV----WHNEKDYHFQCGGSLLTPDLVITAAHCVYDEGTR 422
            ||.|:...:.||.......|:.|||..    |         ||||::..|.|:||.||:.|..:.
  Fly    30 ATKIEGRITNGYAAPEGKAPYTVGLGFSGGWW---------CGGSIIAHDWVLTAEHCIGDAASV 85

  Fly   423 LPYSYDTFRVIAAKFYRNYGE-TTPEEKRRDVRLIEI-------------APGYKGRTENYYQDL 473
            :.|...|:|. .|:|....|. ...:....|:.||.|             .|.|..|..||.:..
  Fly    86 IVYFGATWRT-NAQFTHTVGNGNFIKHSNADIALIRIPHVDFWHMVNKVELPSYNDRYNNYNEWW 149

  Fly   474 ALL-----TLDEPFELSHVIRPI-----CVTFASFAEKESVTDDVQGKFAGWNIENKHELQFVPA 528
            |:.     |.|.        .|:     ||.......:|          .||...:..:      
  Fly   150 AVACGWGGTYDG--------SPLPDWLQCVDLQIVHNEE----------CGWTYGSVGD------ 190

  Fly   529 VSKSNSVCRRNLRDIQADKFCIFTQGKSLACQGDSGG 565
                |.:|.|.:            .|||: |.|||||
  Fly   191 ----NVICTRTV------------DGKSI-CGGDSGG 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 54/223 (24%)
Jon25BiiiNP_608881.1 Tryp_SPc 37..253 CDD:238113 54/225 (24%)
Blue background indicates that the domain is not in the aligned region.

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