DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment modSP and CG30083

DIOPT Version :10

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_725492.3 Gene:CG30083 / 246444 FlyBaseID:FBgn0050083 Length:279 Species:Drosophila melanogaster


Alignment Length:290 Identity:63/290 - (21%)
Similarity:111/290 - (38%) Gaps:76/290 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 QRCEQDCG--QLATPIKQFSSGGYTINNTVVPWHVGLYVWHNEKDYHFQCGGSLLTPDLVITAAH 414
            |..|.:||  .::..|..    |....|...||...::.:::::.....|||:|:....|::|||
  Fly    19 QFLEPNCGYPDISPKIMH----GQNAENGTNPWMAYIFKYNDKEVAELVCGGTLIHKQFVLSAAH 79

  Fly   415 CVYDEGTRLPYSYDTFRVIAAKFYRNYGETTPEEKRRDVRLIEIAPGYKGR---TENYYQDLALL 476
            |:..:           :::|.:.    ||.:..      |...:...::.:   |.:|..|:.:|
  Fly    80 CIKRD-----------QILAVRL----GEHSSS------RYFAVTKAFRNKYFTTGSYSNDIGIL 123

  Fly   477 TLDEPFELSHVIRPICVTFASFAEKESVTDDVQ------GKFAGWNIENKHELQFVPAVSKSNSV 535
            .:....:.:.||||||:          :||..:      .|.|||   .|.|.:....|.|:..:
  Fly   124 RIQPIVKFNAVIRPICI----------ITDPTKVPNVKTFKAAGW---GKTENETFSKVLKTVEL 175

  Fly   536 CRRNLRDIQADKFCIFTQGKSLA-------CQGDSGGGFTSELPTNAFSTWNTARHFLFGVIS-- 591
            ...|..:.....:...|:.:..|       |.|||||.....:..:     .:.|:...|:||  
  Fly   176 NELNASECYNMLWVNVTESQICAGHPDGDTCAGDSGGPLIHPVYMD-----GSLRYVQLGIISFG 235

  Fly   592 ----NAPNADQCAHSLTVMTNIQHFEDMIL 617
                |:|.         |.|.:..|.|.||
  Fly   236 SSLCNSPG---------VYTRLSSFIDWIL 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 56/266 (21%)
CG30083NP_725492.3 Tryp_SPc 34..255 CDD:238113 57/272 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.