DRSC/TRiP Functional Genomics Resources

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Protein Alignment modSP and CG30082

DIOPT Version :10

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_001188942.1 Gene:CG30082 / 246443 FlyBaseID:FBgn0050082 Length:280 Species:Drosophila melanogaster


Alignment Length:323 Identity:80/323 - (24%)
Similarity:118/323 - (36%) Gaps:91/323 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 VCSTGFKTLSPLPEMRCMKGGYWNRGRQRCEQDCG-QLATPIKQFSSGGYTINNTVVPWHVGLYV 388
            ||.|        |::|.          |..:.:|| .:..|......||.|.:....||...|: 
  Fly    13 VCLT--------PKLRA----------QFIDPNCGTTINLPPTNRIVGGRTADIGSNPWLAYLH- 58

  Fly   389 WHNEKDYHFQCGGSLLTPDLVITAAHCV------------YDEGTRLPY-------SYDTFRVIA 434
                |:....|.|:|:|...|:|||||:            ||..||:..       :|:.:.|..
  Fly    59 ----KNSSLVCTGTLITKRFVLTAAHCLHSFHLLTVRLGEYDTSTRIDCTSEFCIPTYEEYSVEN 119

  Fly   435 AKFYRNYGETTPEEKRRDVRLIEIAPGYKGRTENYYQDLALLTLDEPFELSHVIRPICVTFASFA 499
            |..:..:|      .|:|.|                .|:.||.|:........|||||:    |.
  Fly   120 AYIHTFFG------GRQDSR----------------NDIGLLKLNGTVVYKLFIRPICL----FR 158

  Fly   500 EKESVTDDVQGKFAGWN----IENKHELQFVPAVSKSNSVCRRNLR-DIQADKFCIFTQGKSLAC 559
            :...|......:.|||.    |.....||.|..:....|.|.|:|| .:...:||. .|.::..|
  Fly   159 DPGQVPYSSTYEAAGWGKIDLINTATVLQTVNLIRLDQSDCERSLRTSLSYGQFCA-GQWRADTC 222

  Fly   560 QGDSGGGFTSELPTNAFSTWNTARHFLFGVISNAPNADQCAHSLT----VMTNIQHFEDMILN 618
            .|||||..:.::     |.....|....|::|       ..|.|.    |.|.:..|.:.||:
  Fly   223 SGDSGGPLSRKM-----SNGRITRTVQLGIVS-------YGHYLCRGPGVYTYVPSFTNWILS 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 69/272 (25%)
CG30082NP_001188942.1 Tryp_SPc 40..274 CDD:238113 71/278 (26%)
Blue background indicates that the domain is not in the aligned region.

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