DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gyc89Db and odr-1

DIOPT Version :10

Sequence 1:NP_650551.1 Gene:Gyc89Db / 42002 FlyBaseID:FBgn0038436 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001362115.1 Gene:odr-1 / 181479 WormBaseID:WBGene00003848 Length:1047 Species:Caenorhabditis elegans


Alignment Length:597 Identity:150/597 - (25%)
Similarity:226/597 - (37%) Gaps:145/597 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 KLTEGPLTVIVKYRLD-------------FDNRDYMAKRVNVIAHPSQLKMPSVDLNVFLEL--- 228
            |:.:..|.:||....|             .||...:..|..|....:.:.....:...|.::   
 Worm   455 KVPKESLKIIVNKNADAKMQRELENRASNTDNAAALTSRRRVFGSYALVGTQRAEYVQFKQIRKI 519

  Fly   229 -FPFTIV--------LDHDMKITLAG----EKIVETWILHNPGVNPKTFIGSHILERFKCRRPKD 280
             ||.|.:        |.||......|    :.|:...|||       |.:....||.|...|...
 Worm   520 NFPETTLDYLYSLKQLQHDNLAKFYGIQVNDDIMTMTILH-------TLVERGTLEEFCLDRDFG 577

  Fly   281 TQIQWETILQMRTVLFEFELIRTGHNRAAYDAALNFDFENFDEASS----LNEAQAMALASAKEF 341
            ....:::.. ||.:|...:.:...          :..:....:||:    :|....:.|.....|
 Worm   578 MDDTFKSAF-MRDILKGLQYLHKS----------SIGYHGHLQASTCLIDINWVLKLTLYGVSNF 631

  Fly   342 -----SAENAK--EEAAAAATSKD----------EIDPATGQ-----RRHSVGLRSILLKGQMFY 384
                 .|||.|  |:||...|...          |.|.:..|     |....|  .|...|.:||
 Worm   632 MSDQLDAENIKVPEQAAHMITYPQYVCFPPEHIREYDDSGKQPPRVVRGSPKG--DIYCVGMIFY 694

  Fly   385 IKDVDSLIFLCSPLIENLDELHGI--------GLYLNDLNPHGLSR------------ELVMAGW 429
            :            ::|..|..|.|        .|....||.:.:.|            |:....|
 Worm   695 M------------MVEREDPYHLIHSVERPNATLIKQILNENHMPRITDDYRQENMLLEMCKECW 747

  Fly   430 QH--------------------CSK---LEIMFEKEEQRSDELE-----KSLELADSWKRQGDEL 466
            ..                    .||   ::.|....|:.:||||     ::.:|||: :.|...|
 Worm   748 DRNPDKRPTIKKLIESISTVYPLSKGNLVDQMIRMSEKYADELEQMVAIRTADLADA-QMQTMRL 811

  Fly   467 LYSMIPRPIAERMRKSEEHVCQSFEEVSVIFIEVMNIYDSGSNNIQDAMQAVTTLNKVFSALDEE 531
            |..|:|..||:.::.......:|:|..:|:|:::.:.  :.........|.:..||.::...|..
 Worm   812 LNEMLPASIAKDLKNGLIMPPRSYESATVMFVQICDF--NALMKRSSPEQVIAFLNDIYDQFDTV 874

  Fly   532 IISPFVYKVETVGMVYMAVSGAPDVNP-LHAEHACDLALRVMKKVKAHALP-----GVAIRVGIN 590
            |.....|||||.|..||..||.|..|. .|.....:::|.:.:....:.|.     .:.||:|.:
 Worm   875 IKRHDAYKVETTGETYMVASGVPHENEGRHIFEVAEISLEIREISYIYVLQHDKNYKLRIRIGFH 939

  Fly   591 SGPVVAGVVGMKVPRYCLFGDTVNTASRMESSSDPWMIQLSNYTA-LKVQKVGYKVEARGFVKVK 654
            :||:.|||:|::.|||||||||||.||||:|:..|..||.|..|| |......||...||.|.||
 Worm   940 AGPIAAGVIGIRSPRYCLFGDTVNFASRMQSNCPPNQIQTSEITARLLFDSHEYKFVKRGIVHVK 1004

  Fly   655 GKGEMETYWLLE 666
            ||||:..|||.|
 Worm  1005 GKGEVNCYWLNE 1016

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc89DbNP_650551.1 HNOB 2..161 CDD:462233
HNOBA 218..479 CDD:462234 70/350 (20%)
Nucleotidyl_cyc_III 488..665 CDD:448371 69/183 (38%)
odr-1NP_001362115.1 Periplasmic_Binding_Protein_type1 63..378 CDD:471960
PK_GC 495..768 CDD:270894 53/304 (17%)
CYCc 803..996 CDD:214485 66/195 (34%)
Blue background indicates that the domain is not in the aligned region.

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