DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: mRpS33 and RSM27

Sequence 1:NP_524380.1 Gene:mRpS33 FlyBaseID:FBgn0038426 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_011731.3 Gene:RSM27 SGDID:S000003447 Length:110 Species:Saccharomyces cerevisiae

Alignment Length:123 Identity:29/124 (23%)
Similarity:44/124 (35%) Gaps:43/124 (35%)


  Fly     8 LIKVGTQYARRMNYLSNRIFGE---------VARTTNE--KSMKVVRMFSEEPIHKRDYVINWYP 61
            |:||..        ||.:||.:         .::..||  |...|...:....|.|..::...||
Yeast     8 LLKVAE--------LSAKIFDQNFNPSGIRTGSKILNERLKGPSVASYYGNPDILKFRHLKTLYP 64

  Fly    62 RHVETHLLMKNLRDYGLFRDEHQDFKEEMKRLRKLRGKAPPK----------KGEGKR 109
             .:|             |.|..:.::..|...:|.|||..||          ||:||:
Yeast    65 -DIE-------------FVDLEEQYRLSMVEAKKRRGKGAPKKMKKDAAATAKGKGKK 108

Known Domains:


GeneSequenceDomainRegion External IDIdentity
mRpS33NP_524380.1 MRP-S33 15..104 CDD:285492 22/110 (20%)
RSM27NP_011731.3 MRP-S33 6..93 CDD:311962 25/107 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 LDO PTHR13362
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.