DRSC/TRiP Functional Genomics Resources

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Protein Alignment: mRpS33 and AT5G44710

Sequence 1:NP_524380.1 Gene:mRpS33 FlyBaseID:FBgn0038426 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_199284.2 Gene:AT5G44710 AraportID:AT5G44710 Length:102 Species:Arabidopsis thaliana

Alignment Length:95 Identity:35/96 (36%)
Similarity:47/96 (49%) Gaps:24/96 (25%)


  Fly    25 RIFGEVARTTNEKS-MKVVRMFSEEPIHKR---DYVINWYPRHVETHLLMKNLRDYGLFRDEHQD 85
            ||||.:...|.::| .|::|        |:   |.|..|||..:      ||.....|.|:|   
plant    24 RIFGHMLNPTGQRSPHKILR--------KKLIGDKVAEWYPYDI------KNEDPNVLAREE--- 71

  Fly    86 FKEEMKRLR--KLRGKAPPKKGEGKRASKK 113
             ||.:.:|.  |.|.|.|||||.||||:|:
plant    72 -KERISKLEMLKRRDKGPPKKGHGKRAAKR 100

Known Domains:


GeneSequenceDomainRegion External IDIdentity
mRpS33NP_524380.1 MRP-S33 15..104 CDD:285492 28/85 (33%)
AT5G44710NP_199284.2 MRP-S33 18..91 CDD:285492 28/85 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 LDO PTHR13362
Phylome 00.000 Not matched by this tool.
11.100

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