DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS33 and AT5G44710

DIOPT Version :9

Sequence 1:NP_524380.1 Gene:mRpS33 / 41991 FlyBaseID:FBgn0038426 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_199284.2 Gene:AT5G44710 / 834500 AraportID:AT5G44710 Length:102 Species:Arabidopsis thaliana


Alignment Length:95 Identity:35/95 - (36%)
Similarity:47/95 - (49%) Gaps:24/95 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RIFGEVARTTNEKS-MKVVRMFSEEPIHKR---DYVINWYPRHVETHLLMKNLRDYGLFRDEHQD 85
            ||||.:...|.::| .|::|        |:   |.|..|||..:      ||.....|.|:|   
plant    24 RIFGHMLNPTGQRSPHKILR--------KKLIGDKVAEWYPYDI------KNEDPNVLAREE--- 71

  Fly    86 FKEEMKRLR--KLRGKAPPKKGEGKRASKK 113
             ||.:.:|.  |.|.|.|||||.||||:|:
plant    72 -KERISKLEMLKRRDKGPPKKGHGKRAAKR 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS33NP_524380.1 MRP-S33 15..104 CDD:285492 27/84 (32%)
AT5G44710NP_199284.2 MRP-S33 18..91 CDD:369798 27/84 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13362
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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