DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6126 and sv2

DIOPT Version :10

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_009296040.2 Gene:sv2 / 570651 ZFINID:ZDB-GENE-000607-80 Length:522 Species:Danio rerio


Alignment Length:462 Identity:109/462 - (23%)
Similarity:186/462 - (40%) Gaps:105/462 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 CDRRW----MGAIVQTVFMLGVFTGAVTLGGLADKVGRKTVFCWSALFQLIIGVGVAFIPEYFSF 186
            ||.:.    ||.:..::| ||:..|....|.|||:.||::|...|.......|...:..|.::.|
Zfish    76 CDLQLSSADMGILTASIF-LGMMVGGCVWGFLADRRGRRSVLVVSLAVNGTFGAVASLAPAFWLF 139

  Fly   187 MVARYLLGI-VGSAGAYICGFVLTMELVGPTKRTVCGITFQAVF--AGGIMLVAGWGALIPDRQW 248
            ::.|:..|: ||.:...|..:....:   |..|....|:..|.|  ||.| |.||...|:..|..
Zfish   140 LLLRFFSGVGVGGSIPVIFSYFSEFQ---PCLRRGAMISALATFWMAGNI-LAAGVAWLVIPRTS 200

  Fly   249 LQVIYGLHGCLFLGHWWWLD---------------------------ESPRWLWMQGRAAEAVDI 286
            |.           ..|.|||                           |||::|...||..||:.:
Zfish   201 LN-----------ADWGWLDFQSWRLFVVLCSIPSLSSALIFRLFMPESPKFLMEAGREMEALTV 254

  Fly   287 VAKGLRINGSGI------------PVDKEYYVQKAKQQAAAEE------KSSAGLSDLFRTPNLR 333
            ..|..::|..|.            |.|.|...:.:...:.::.      ::...|..||..| |.
Zfish   255 FQKIYKLNNRGATKPFPVSGLMIRPKDDEVKNRPSHSSSRSQRFINQLTQALVPLKQLFVRP-LA 318

  Fly   334 MKTLNVCLCWFANSLVYYGLSLSAGKLY------GNP----------------------YLILFI 370
            .:::.:.:.:|..|..||||.:...:|:      |:|                      |:..||
Zfish   319 SRSVVLVIIFFCISFGYYGLWMWFPELFKRAEDGGSPCANMSRAQNAENEKCYPVKTAVYMEGFI 383

  Fly   371 MGLVEFPSYITIVFVLDRLGRRSITSTLMLGGGLCCIVAAYIAQGSTTSTAV--VMAGKLLIAGS 433
            ......|..|..:.::||:|.:.:.|..:|..|:...| .|:.:..|.|..|  |.:|..:|  |
Zfish   384 TAASNLPGNIFTILLMDRIGGKILLSVSLLVSGVSVFV-IYVVKTKTQSLIVSCVFSGVSVI--S 445

  Fly   434 FAVIYNYSAELFPTVVRNSAMGLGSMCARLSGALTPLI--TLLDSFDPKIPAVLFGVVALISGFW 496
            :..:.....||:||.:|:||:|:.:...|::..:..::  .|:|| ...:|.::..|:.|..|..
Zfish   446 WNALDVVGTELYPTQLRSSALGVFTGVGRVAAIMGNVVFGQLVDS-SCAVPLLMVCVLLLAGGLA 509

  Fly   497 VMFLPET 503
            .::||:|
Zfish   510 ALWLPQT 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 109/462 (24%)
sv2XP_009296040.2 None

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