DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6126 and Svopl

DIOPT Version :10

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001418754.1 Gene:Svopl / 500085 RGDID:1566053 Length:494 Species:Rattus norvegicus


Alignment Length:545 Identity:114/545 - (20%)
Similarity:204/545 - (37%) Gaps:154/545 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YVLEDLMGKLGEFGKYQFLQFFLQVLSGLTAGMHMLSLVTVAAVPEHRCFIEGVDNSSLSVTPWN 69
            :.:||.:..:| ||::....|.:...:|:...|.::.:..|:.|                     
  Rat    32 FTVEDAVETIG-FGRFHIALFLIMGSTGVVEAMEIMLIAVVSPV--------------------- 74

  Fly    70 SSAILAAIPLKPNGELESCLMFDPSSPGTNTTINCERYVYDTTYYKTSRTIDWNFVCDRRWMGAI 134
                                            |.||                |..   ..|..|.
  Rat    75 --------------------------------IRCE----------------WQL---ENWQVAF 88

  Fly   135 VQTVFMLGVFTGAVTLGGLADKVGRKTV----FCWSALFQLIIGVGVAFIPEYFSFMVARYLLGI 195
            |.|:...|....::..|.|||:.||..:    |.|.|.|.|:    .:|.|.|..|:..|.::| 
  Rat    89 VTTMVFFGYMVSSILFGLLADRYGRWKILLLSFLWGAYFSLL----TSFSPSYIWFVFLRTMVG- 148

  Fly   196 VGSAGAYICGFVLTMELVGPTKRTVCGITFQAVF--AGGIMLVAGWGALIP--DRQWLQVIYGLH 256
            .|.:| :..|.::..|.: |||.....:....||  ||.:::::....:||  ..:||..|..:.
  Rat   149 CGVSG-HAQGLIIKTEFL-PTKYRGYMLPLSQVFWLAGSLLIISMASVVIPTIGWRWLIRIASIP 211

  Fly   257 GCLFLGHWWWLDESPRWLWMQGRAAEAVDIVAKGLRINGSGIPVDK--EYYVQKAKQQAAAEEKS 319
            |.:.:..:.::.||.|:....|....|:|.:....::|.|.:|..:  |..::|..:        
  Rat   212 GIILIMAFKFIPESARFNVSTGNTQAALDTLESIAKMNRSVMPEGRLVEPILEKRGR-------- 268

  Fly   320 SAGLSDLFRTPNLRMKTLNVCLCWFANSLVYYGLSLSAGKLY----------------------- 361
               .:||..:..|| .||.:.:.|...|..|||:.|::.:|.                       
  Rat   269 ---FADLLESKYLR-TTLQIWIIWLGISFAYYGVILASAELLERDLVCGSKSESEPEVVENMGDA 329

  Fly   362 -------------GNPYLILFIMGLVEFPSYITIVFVLDRLGRRSITSTLMLGGGLCCIVAAYIA 413
                         .:.|..:.|..|.|.......:..::.|||| ::.::.:|    |....::.
  Rat   330 EEGRSPCYCHMFAPSDYRTMIISTLGEIALNPLNILGINFLGRR-LSLSITMG----CTALFFLL 389

  Fly   414 QGSTTSTAVVMAG----KLLIAGSFAVIYNYSAELFPTVVRNSAMGL-GSMCARLSGALTPLITL 473
            ....||:|.::..    :.|:|.:|..||.|:||::||.:|...||. ||:| |:...:.|.|:.
  Rat   390 LNICTSSAGLIGFLFMLRALVAANFNTIYIYTAEVYPTPMRALGMGTSGSLC-RIGAMVAPFISQ 453

  Fly   474 LDSFDPKIPAVLFGVVALISGFWVM 498
            :     .:.|...|.:.|.|...|:
  Rat   454 V-----LMSASFLGALCLFSSVCVV 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 112/535 (21%)
SvoplNP_001418754.1 MFS_SVOPL 49..482 CDD:341000 109/527 (21%)

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