DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6126 and slc22a4

DIOPT Version :10

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_957143.1 Gene:slc22a4 / 393822 ZFINID:ZDB-GENE-040426-1517 Length:553 Species:Danio rerio


Alignment Length:540 Identity:165/540 - (30%)
Similarity:260/540 - (48%) Gaps:52/540 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DYVLEDLMGKLGEFGKYQFLQFFLQVLSGLTAGMHMLSLVTVAAVPEHRCFI-EGVDNSSLSVTP 67
            ||  :|:...||.:|.:|...|....:|.|..|...|.:|.|...|.|.|.| |.::.||:    
Zfish     3 DY--DDITSFLGTWGPFQLTVFLALAISILPNGFVGLYIVFVGDTPAHECLIPEQINISSV---- 61

  Fly    68 WNSSAILAAIPLK-PNGELE--SC-------------LMFDPSSPGTNTTINCERYV----YDTT 112
            |..    ||||.: .:|.|:  ||             |.:.|:.....:.|..|..|    |...
Zfish    62 WRD----AAIPTQMQDGVLKRSSCSRYRLDTLRQLSMLNYTPNVEVNLSQIETEPCVDGWSYSQE 122

  Fly   113 YYKTSRTIDWNFVCDRRWMGAIVQTVFMLGVFTGAVTLGGLADKVGRKTVFCWSALFQLIIGVGV 177
            :|:::...:|:.||:|.:.|.:..:::..||..|....|.::|:.||:.|.......|.|..:..
Zfish   123 FYQSTIVTEWDLVCEREYKGPLTSSIYFCGVLVGTFLSGQMSDRYGRRPVLFTMMALQTITILIQ 187

  Fly   178 AFIPEYFSFMVARYLLGIVGSAGAYICGFVLTMELVGPTKRTVCGITFQAVFAGGIMLVAGWGAL 242
            .|.|.:..|....:.:|..|.:. |:..:||..|::.|..|.:.|       :.|:.:.:|.|.:
Zfish   188 MFSPSWEVFSAIYFFVGFSGFSN-YVVAYVLGSEILSPASRVLFG-------SLGVFMGSGIGQM 244

  Fly   243 --------IPDRQWLQVIYGLHGCLFLGHWWWLDESPRWLWMQGRAAEAVDIVAKGLRINGSGIP 299
                    |...:||.:...|.|.|:...||::.||||||..|||.|||..::.:....|....|
Zfish   245 FFPLAAYFIRSWRWLVLTNALTGLLYFPLWWFIPESPRWLLSQGRTAEAEAVLRRAAEKNRVTAP 309

  Fly   300 VDKEYYVQKAKQQAAAEEKSSAGLSDLFRTPNLRMKTLNVC-LCWFANSLVYYGLSLSAGKLYGN 363
              :..:.....::||.:......:.|:....| .:.|:.:| |.|...::.||.|.|:...|:||
Zfish   310 --EVIFSSSEIEEAAKKRIQKHSILDILSNCN-AVSTILICSLLWMVITMSYYALILNTTNLHGN 371

  Fly   364 PYLILFIMGLVEFPSYITIVFVLDRLGRRSI-TSTLMLGGGLCCIVAAYIAQGSTTSTAVVMAGK 427
            |||..|:..:||.|:||....:|....||.. .|||:|||.|..|:.....:....:||:.|.||
Zfish   372 PYLNFFLSAVVEVPAYIIAALLLRFCSRRICQASTLLLGGALIFIIQLIPTELQGLATALEMLGK 436

  Fly   428 LLIAGSFAVIYNYSAELFPTVVRNSAMGLGSMCARLSGALTPLITLLDSFDPKIPAVLFGVVALI 492
            |.:..:|.|:|..::|||||||||.|||..||.||:...::|.|..|.::...||.::.|.:||.
Zfish   437 LCVTAAFCVVYAVTSELFPTVVRNMAMGSCSMTARIGSIISPFIIYLGNYYRYIPYIVIGGLALF 501

  Fly   493 SGFWVMFLPETMNQPMPESI 512
            ||...:.|||:..:.:||:|
Zfish   502 SGVMSLLLPESKGKVLPETI 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 158/525 (30%)
slc22a4NP_957143.1 MFS_SLC22A4_5_OCTN1_2 106..510 CDD:340934 127/414 (31%)

Return to query results.
Submit another query.