DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6126 and CarT

DIOPT Version :10

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster


Alignment Length:579 Identity:168/579 - (29%)
Similarity:287/579 - (49%) Gaps:82/579 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AVD--YVLEDLMGKLGEFGKYQ-FLQFFLQVLSGLTAGMHMLSLVTVAAVPE------------- 50
            :||  :.|:||:..:||||||| .|.|.:.:.:.:..|....:.:.:|..|:             
  Fly    29 SVDEAFDLDDLLPTIGEFGKYQKLLVFGICLPACIPCGFCAFNQLFMADTPDDYWCRIPELLDLP 93

  Fly    51 --------------------HRCFIEGVDNSSLSVTPWNSSAILAAIPLKPNGELESCLMFDPSS 95
                                .:|:..||:        |..        |..:||.:.....:|::
  Fly    94 LEQRKSLSIPKELDNDELVYSKCYTYGVN--------WTQ--------LLESGEEDDLTTMEPNA 142

  Fly    96 PGTNTTINC-ERYVYDTTYYKTSRTIDWNFVCDRRWMGAIVQTVFMLGVFTG---AVTLGGLADK 156
              :...|.| :.:.|:|:...:|..||::.|||:    .|..|:.:..:.||   .|.|.||.:.
  Fly   143 --SWPLIKCPQGWEYNTSVVWSSIVIDFDLVCDQ----DIYPTIGLAALNTGGPVGVYLFGLLND 201

  Fly   157 VGRKTVFCWSALFQLIIG-VGVAFIPEYFSFMVARYLLGIVGSAGAYICGFVLTMELVGPTKR-- 218
            .|.:.:..:..|..|:.| :..:...:::::..:|.::|:...| .|...|::::||||...|  
  Fly   202 RGGRRLSYFVCLATLLAGSLMTSLSKDFWTWAGSRVIVGLTIPA-VYQIPFIISLELVGENYRSF 265

  Fly   219 -TVCGITFQAVFAGGIMLVAGWGALIPDRQWLQVIY--GLHGCLFLGHWWWLDESPRWLWMQGRA 280
             ||...||   :..||||::|...|  :|.|:::.|  .|....:..:.:.:.||||||.|:||.
  Fly   266 VTVMTCTF---YTSGIMLLSGVTYL--ERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRL 325

  Fly   281 AEAVDIVAKGLRINGSGIP----VDKEYYVQKAKQQAAAEEKSSAGLSDLFRTPNLRMKTLNVCL 341
            .||:.|:.:..::||...|    :..|..:::.|.:...::.::.||:||.||||:|:||:.:.|
  Fly   326 EEALKILERMAKVNGREFPEAVHLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITL 390

  Fly   342 CWFANSLVYYGLSLSAGKLYGNPYLILFIMGLVEFPSYITIVFVLDRLGRRSITSTLMLGGGLCC 406
            .||||..||.|||.....|..|.|:..|:..:||.|||:...:.:|..|||...|..|:.||:.|
  Fly   391 SWFANETVYLGLSYYGPALGTNQYVSFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVAC 455

  Fly   407 IVAAYIAQGSTTSTAVV-MAGKLLIAGSFAVIYNYSAELFPTVVRNSAMGLGSMCARLSGALTPL 470
            ::...:...:...|.|: :..|.|::.||.:||.::.||:||.||...:|..|....|.....|.
  Fly   456 VITVMLPDDAVDETLVLYLVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPF 520

  Fly   471 ITLLDSFDPKIPAVLFGVVALISGFWVMFLPETMNQPMPESIEDGENFGKGDTW-FSQC 528
            ||.|...:.|:|.|:.|.::::.|...:.||||::..:|::||:||.|||  .| |..|
  Fly   521 ITYLGKDNLKLPLVIMGFLSMLGGMTGLRLPETLHHRLPQTIEEGEEFGK--NWQFKDC 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 152/543 (28%)
CarTNP_610052.1 MFS_SLC22 152..551 CDD:340875 126/408 (31%)
xylE <306..>342 CDD:182225 14/35 (40%)

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