DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6126 and SV2C

DIOPT Version :10

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_055794.3 Gene:SV2C / 22987 HGNCID:30670 Length:727 Species:Homo sapiens


Alignment Length:673 Identity:134/673 - (19%)
Similarity:212/673 - (31%) Gaps:280/673 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GKYQFLQFFLQVLSGLTAGMHMLSLVTVAAVPEHRCFIEGVDNSSLSVTPWNSSAILAAIPLKPN 82
            |::|:..||:..::.:..|:.:              |:.|.                    :.|:
Human   148 GRFQWALFFVLGMALMADGVEV--------------FVVGF--------------------VLPS 178

  Fly    83 GELESCLMFDPSSPGTNTTINCERYVYDTTYYKTSRTIDWNFVCDRRWMGAIVQTVFMLGVFTGA 147
            .|.:.|:   |:| |:.                              |:|:||    .||:..||
Human   179 AETDLCI---PNS-GSG------------------------------WLGSIV----YLGMMVGA 205

  Fly   148 VTLGGLADKVGRK--TVFCWS--ALFQLIIGVGVAFIPEYFSFMVARYLLGIVGSAGAYICGFVL 208
            ...||||||||||  .:.|.|  ..|..:    .:|:..|..|:..|.|.|. |..||....|..
Human   206 FFWGGLADKVGRKQSLLICMSVNGFFAFL----SSFVQGYGFFLFCRLLSGF-GIGGAIPTVFSY 265

  Fly   209 TMELVGPTKRTVCG--ITFQAVF--AGGIMLVAGWGALIPDRQWLQVIYGLHGCLFLGHWW---- 265
            ..|::...||   |  :::..:|  .|||...|...|:||...|...:    |..:..|.|    
Human   266 FAEVLAREKR---GEHLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSM----GSAYQFHSWRVFV 323

  Fly   266 ---------------WLDESPRWLWMQGRAAEAVDIVA----KGLRINGSGIPVDKEYYVQKAKQ 311
                           ::.||||:|...|:..||..|:.    ..:|..|.   .:|.:.|.|.|.
Human   324 IVCALPCVSSVVALTFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQ---PEKVFTVNKIKT 385

  Fly   312 QAAAEE----KSSAGL----------SDL----------FRTPNLRMKTLNVCLCWFANSLVYYG 352
            ....:|    :|..|.          ::|          |..| :|..|:.:.:.||..|..|||
Human   386 PKQIDELIEIESDTGTWYRRCFVRIRTELYGIWLTFMRCFNYP-VRDNTIKLTIVWFTLSFGYYG 449

  Fly   353 LS---------------------------------------LSAGKLYGNP-------------- 364
            ||                                       :..|..|.|.              
Human   450 LSVWFPDVIKPLQSDEYALLTRNVERDKYANFTINFTMENQIHTGMEYDNGRFIGVKFKSVTFKD 514

  Fly   365 ----------------------------------------------------------------- 364
                                                                             
Human   515 SVFKSCTFEDVTSVNTYFKNCTFIDTVFDNTDFEPYKFIDSEFKNCSFFHNKTGCQITFDDDYSA 579

  Fly   365 ---YLILFIMGLVEFPSYITIVFVLDRLGRRSITSTLMLGGGLCCIVAAYIAQGSTTSTAVVMAG 426
               |.:.|:..|...|..|....::||:||.::....|:..|:.|.   ::..|::.|   :|.|
Human   580 YWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCF---FLWFGTSES---MMIG 638

  Fly   427 KLLIAGSFAV-IYN----YSAELFPTVVRNSAMG-LGSMC--ARLSGALTPLITLLDSFDPKIPA 483
            .|.:.....: .:|    .:.||:||..|.:..| |.::|  |.:.|.|  :...|.|....||.
Human   639 MLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNL--IFGSLVSITKSIPI 701

  Fly   484 VLFGVVALISGFWVMFLPETMNQ 506
            :|...|.:..|...:.||:|..|
Human   702 LLASTVLVCGGLVGLCLPDTRTQ 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 134/673 (20%)
SV2CNP_055794.3 synapt_SV2 1..727 CDD:130366 134/673 (20%)
Interaction with SYT1. /evidence=ECO:0000250 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..84
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 109..128
(Microbial infection) C.botulinum neurotoxin type A-binding. /evidence=ECO:0000269|PubMed:27294781 519..563 0/43 (0%)
Blue background indicates that the domain is not in the aligned region.

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