DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6126 and Svop

DIOPT Version :10

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_599231.3 Gene:Svop / 171442 RGDID:620277 Length:548 Species:Rattus norvegicus


Alignment Length:576 Identity:132/576 - (22%)
Similarity:219/576 - (38%) Gaps:146/576 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YVLEDLMGKLGEFGKYQFLQFFLQVLSGLTAGMHMLSLVTVAAVPEHRCFIEGVDNSSLSVTPWN 69
            :::||.:..:| ||::|:.   |.||:||.                                 |.
  Rat    68 FMVEDAVEAIG-FGRFQWK---LSVLTGLA---------------------------------WM 95

  Fly    70 SSAILAAIPLKPNGELESCLMFDPSSPGTNTTINCERYVYDTTYYKTSRTIDWNFVCDRRWMGAI 134
            :.|:          |:....:..|.       ::||                |..   ..|..|:
  Rat    96 ADAM----------EMMILSILAPQ-------LHCE----------------WRL---PSWQVAL 124

  Fly   135 VQTVFMLGVFTGAVTLGGLADKVGRKTVFCWSALFQLIIGVGVAFIPEYFSFMVARYLLGIVGSA 199
            :.:|..:|:.:.:...|.::|:.||||....|..:.|..|:..||.|.|...:|.|.|:|.  ..
  Rat   125 LTSVVFIGMMSSSTLWGNISDQYGRKTGLKISVFWTLYYGILSAFAPVYSWILVLRGLVGF--GI 187

  Fly   200 GAYICGFVLTMELVGPTKRTVC----------GITFQAVFAGGIMLVAGWGALIPDRQWLQVIYG 254
            |.......|..|.:....|..|          |..|:.:.|..:|...||       :||.::..
  Rat   188 GGVPQSVTLYAEFLPMKARAKCILLIEVFWAIGTVFEVLLAVFVMPSLGW-------RWLLLLSA 245

  Fly   255 LHGCLFLGHWWWLDESPRWLWMQGRAAEAVDIVAKGLRINGSGIPVDKEYYVQKAKQQAAAEEKS 319
            ....:|....:||.||.|:..:.|...:|:..:.:....||:.:|:.|         ...:.::.
  Rat   246 APLLVFAVLCFWLPESARYDVLSGNQEKAIATLKRIATENGAPMPLGK---------LIISRQED 301

  Fly   320 SAGLSDLFRTPNLRMKTLNVCLCWFANSLVYYGL---------------------------SLSA 357
            ...:.||| ||:.|..||.:...||:|:..||||                           ||:.
  Rat   302 RGKMRDLF-TPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLAC 365

  Fly   358 GKLYGNPYLILFIMGLVEFPSYITIVFVLDRLGRRSITSTLMLGGGLCCIVAAYIAQGSTTSTAV 422
            ..|....|:.|....|.|||..:..::|:|||||:...:...:...||.:: .:|..|....|.:
  Rat   366 EYLSKEDYMDLLWTTLSEFPGVLVTLWVIDRLGRKKTMALCFVIFSLCSLL-LFICIGRNVLTLL 429

  Fly   423 VMAGKLLIAGSFAVIYNYSAELFPTVVRNSAMGLG--SMCARLSGALTPLI--TLLDSFDPKIPA 483
            :...:..|:|.|...|.|:.|::||..|  |:|||  |..||:...:||.|  .:|:| ...:..
  Rat   430 LFIARAFISGGFQAAYVYTPEVYPTATR--ALGLGTCSGMARVGALITPFIAQVMLES-SVYLTL 491

  Fly   484 VLFGVVALISGFWVMFLP-ETMNQPMPESIEDGENFGKGDTWFSQCAGRKKRQNSV 538
            .::....|::.....||| ||..:.:.||        ....|..:..||......|
  Rat   492 AVYSGCCLLAALASCFLPIETKGRALQES--------SHREWGQEMVGRGTNSTGV 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 124/536 (23%)
SvopNP_599231.3 MFS_SVOP 87..509 CDD:340999 115/513 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 523..548 4/17 (24%)

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