DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mhcl and AgaP_AGAP008221

DIOPT Version :9

Sequence 1:NP_732109.2 Gene:Mhcl / 41955 FlyBaseID:FBgn0026059 Length:2194 Species:Drosophila melanogaster
Sequence 2:XP_555244.3 Gene:AgaP_AGAP008221 / 3291681 VectorBaseID:AGAP008221 Length:1719 Species:Anopheles gambiae


Alignment Length:522 Identity:105/522 - (20%)
Similarity:171/522 - (32%) Gaps:176/522 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 ADANGGSNGGA-------VGAADPEQDRGNEEIVASVMTHIESRASNGAGVSVNYSEVTHSLLSG 148
            |..|||.|||.       ..|.|..|:.|   |..:|:..:::..:|     .|:.   |.||  
Mosquito   186 AQTNGGLNGGGRKLTKSLSEAGDRLQENG---IDPNVLQPVDTGTAN-----ANFD---HELL-- 237

  Fly   149 GLKNRFLPPIPPK-------PPKRGI-----LKGSRSNMTNVHEEISFAGSAGGAGGTPEMLLRN 201
               :|.....|||       ||...:     |..||::....|.:           ||.....||
Mosquito   238 ---HRTQSEEPPKSPFTITSPPATHVGPHFELPSSRTSSQLSHSD-----------GTHLTHSRN 288

  Fly   202 TFQNESLYEGAARGAGSIGSNSSQHGTSFTSVESLRSDGEQTGGQQRAMTLPANARYGALPQ--- 263
                                :|....||:.|     :||.:|..:      .|:..|.|||:   
Mosquito   289 --------------------HSQDSATSYRS-----TDGSRTSYE------TASYPYDALPRRTC 322

  Fly   264 --GNSQGSHLHVL-------------------TSPSPSADSLTDTTNSSFATPPFSLSPVGESQG 307
              ...:..|.|.|                   :.|:..|......:|.|......|...:..:..
Mosquito   323 IHHKPEEFHTHTLPRRDHGHAHHHHDIVYRDQSHPALPAPEHLILSNGSVNQDVRSFDSMPTATA 387

  Fly   308 IDRWARVHAFEDVELPLPPVQLVKLPPPRQLV-IRRQKSPRQDFGFSLRKAICLDRTESLTSPIF 371
            ::|....||   :..|..|  |||..||.... ...|.:|..          |     .:|.|..
Mosquito   388 LNRRMSAHA---ITQPFQP--LVKPQPPTLTSHYTSQTAPPS----------C-----PVTPPNI 432

  Fly   372 RPVIFAE--PGAGGGATGLLPGDRLIKVNGTPVGELPREIIIEMIRNSGEAVTVEVQPVAELVEL 434
            :|:...:  ..:..|:......|...:::|.| || .|||.|:.        ...|.||.     
Mosquito   433 QPLDMQDDTKSSSEGSCSTCDSDSEQELDGMP-GE-EREIFIDF--------KPRVSPVP----- 482

  Fly   435 SKRCMAPSTATVEEIDHSITNGNCNTLRRSASKRFKRQSRHENGNG-------GGEEGGAKGVGH 492
                 :|.....:::..:.:.|.   |..:.::|  :.|...:|:|       |.::.|...:..
Mosquito   483 -----SPGAVKKKKLQKAQSEGE---LMHADARR--KASVTADGDGGSSTVPTGSDDEGRSTMRE 537

  Fly   493 DLEA---------DVADASQPE---RVWLVHRGGF---TAAIRLPTASSGRDEENKLSLRLLHNG 542
            ...|         |.:::|.|:   :|....:..|   :.::..||:....|||.:     .|||
Mosquito   538 QCAAPKLPKPDYRDASESSVPDDEPQVKDRRKESFRKRSVSLDQPTSCEQEDEEER-----EHNG 597

  Fly   543 EQ 544
            .|
Mosquito   598 TQ 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MhclNP_732109.2 PDZ_signaling 339..426 CDD:238492 16/89 (18%)
MYSc 556..1317 CDD:214580
MYSc_Myo18 575..1305 CDD:276837
GBP_C <1540..1750 CDD:303769
COG1340 1565..1833 CDD:224259
coiled coil 1723..1734 CDD:293879
AgaP_AGAP008221XP_555244.3 NESP55 <387..583 CDD:115071 44/240 (18%)
PDZ_signaling 1421..1496 CDD:238492
PH-like 1507..1609 CDD:302622
PH 1514..1608 CDD:278594
PH-like 1633..1719 CDD:302622
PH 1635..1719 CDD:278594
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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