DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mhcl and AgaP_AGAP000209

DIOPT Version :9

Sequence 1:NP_732109.2 Gene:Mhcl / 41955 FlyBaseID:FBgn0026059 Length:2194 Species:Drosophila melanogaster
Sequence 2:XP_310924.4 Gene:AgaP_AGAP000209 / 1272056 VectorBaseID:AGAP000209 Length:1068 Species:Anopheles gambiae


Alignment Length:976 Identity:192/976 - (19%)
Similarity:294/976 - (30%) Gaps:334/976 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 KRGILKGSRSNMTNVHEEI-SFAGSAGGAGGTPEMLLRNT--FQNESLYEGAARGAGSIGSNSSQ 225
            |:|:...|.:..:.|.... :..|..||.||.   :|..|  |.|        .|.|...||.|.
Mosquito     7 KKGVAASSGTTTSCVSSSTGTLKGGGGGGGGG---MLSKTCKFSN--------GGNGGSSSNQSS 60

  Fly   226 HGTSFTSVESLRSDGEQTG--GQQRAMTLPAN---ARYGALPQGNSQ-GSHLHVLTSPSPSADS- 283
            :|:|.:|..|..|:|..:.  ....|.|...|   ...|.|||..:| ||......||:.|.|| 
Mosquito    61 NGSSSSSSNSSNSNGHSSSVLDDSSAETSFINHHQGTNGTLPQDGAQPGSASDRAMSPAQSEDSG 125

  Fly   284 LTDTTNSSFATPPFSLSPVGESQGIDRWARVHAFEDVELPLPPVQLVKLPPPRQLVIRRQKSPRQ 348
            |.....:::||                         :.:|....|:       .:|:    :.|.
Mosquito   126 LAADRGTTYAT-------------------------ISIPRDSGQI-------GIVL----AERN 154

  Fly   349 DFGFSLRKAICLDRTESLTSPIFRPVIFAEPGAGGGATGLLPGDRLIKVNG-TPVGELPREIIIE 412
            |..|.       ...||::.|:              |..|.||||:.:|:| :.:|...::|...
Mosquito   155 DLSFP-------PMVESISGPV--------------ADLLAPGDRIHQVDGVSTIGLSNQQIFSI 198

  Fly   413 MIRNSGEAVTVEVQ-PVAELVELSKRCMAPSTATVEEIDHSITNGNCNTLRRSASKRFKRQSRHE 476
            :....|.|| :|:: ...|.:..:..|:....|.:             |:.|            |
Mosquito   199 LCHGEGPAV-IEIEYSFPEYISQNSLCVTTKIAQI-------------TVER------------E 237

  Fly   477 NG------NGGGEEGGAKGVGHDLEADVADASQPERVWLVHRGGFTAAIRLPTASSGRDEENKLS 535
            ||      .||||                   .|..|..|...|       |...:|:.:.....
Mosquito   238 NGCLGLTLRGGGE-------------------YPLVVTNVRMNG-------PVFKTGQIKPGDRV 276

  Fly   536 LRLLHNGEQLTVDEDDV---EKQNSPALDLVEDICELKYLN-----EASVLHCLRQRYASNLIHT 592
            ||:           |:|   .|..|.|..:::|:....|.|     :.||:         ..:..
Mosquito   277 LRV-----------DNVSLLNKSLSEAQHILKDVHASGYTNLMIEYDVSVM---------QTVEL 321

  Fly   593 KAGPTLL-VVNPMAP-----LSLYSEKVVSMFRGCKTEDMPPHVYSLAQTAYRSLVETRRDQSLI 651
            ..||.|| :..||..     ||.||..|              ::..:..::|: |.|.:.|...|
Mosquito   322 SMGPLLLEIERPMNEKLGLILSNYSSAV--------------NLNDIYHSSYK-LNEVQPDGIFI 371

  Fly   652 -------FMGRSGSGKSTSFKHALNYLALAAGAYNNFINAEKV-NALCTILEAFGNTKTCLNSNA 708
                   ...|.|              ||..|.....|:...| |.:||:.||    ...|::|.
Mosquito   372 ASILPASIADRCG--------------ALTVGDQILSIDESVVDNGVCTLEEA----TALLDANC 418

  Fly   709 TR-MTQLLSL---------------------DFDQTGQIASASLQVLLPERQRAGRRLGHEHSFH 751
            .: .|||..|                     ..|....:||..       ..:..|||..:.|..
Mosquito   419 VKGYTQLHILPAHMFVRRRGISCSSPRYGFNTVDSRKNLASGG-------NSKHARRLLRKSSLP 476

  Fly   752 IMTR--LLAGAAGLLQKE-LHLENITSEDSHPFIS--------------LSQKLEDRHRAANDFM 799
            ....  ||..:.||.:.| :||....|..|...:.              |...:.:|........
Mosquito   477 QTAEDGLLQSSGGLCRAEKIHLILDCSAGSGICLGPKTACGRGFLIAQILPDSVAERSGCLQKGD 541

  Fly   800 RTVQAFETLNIDAKAVRGIWS-----ILAAIYHLGIAGVTKLGTGSTA-----RTQFANPTAARK 854
            |.:...:..::|..|.|.:..     .:|..||         ....|:     ..:|....|...
Mosquito   542 RLIAINKLRDLDVNAARQLLGDYGPVTVANHYH---------NQAPTSHWVELEVEFDMADAVVP 597

  Fly   855 ASGLLGVNLEDLSSAAFGLTQPNAPNGGLSPSKSPTSDTGH------------------------ 895
            |||:..:.|...|....|:|.....:|....|:.......|                        
Mosquito   598 ASGVFNIKLRKQSRCGLGITVNGNAHGSFLISEVKPGSAAHRTGSLRAGDLLMAVDNRPLQHYNL 662

  Fly   896 -----EWAWECLEALV----------------IGLYSEALAAVV----ALINRQICTSSHTIASI 935
                 |...||:...|                .|||..|..:..    .::.....|.|:.|...
Mosquito   663 DLLLKESKNECITLTVKRNSLPDFLYDAQQKPAGLYGSAEESGAYTDGTMLKMNSSTESYAIEDQ 727

  Fly   936 M----LIDTPGFQN-PASCGQQVGATLADLRHNYLQERLQMLFHH--TTLVAPRDRYAQELVEIE 993
            :    ...||.:.. |...||..|...|..:.....|.|.:...|  |....|.|....:::..:
Mosquito   728 LRRPVWSSTPSYDGAPMGTGQGTGTLKAPTQPGGSAEHLPLPPAHLLTMDSEPADDRYDDILHYK 792

  Fly   994 M 994
            |
Mosquito   793 M 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MhclNP_732109.2 PDZ_signaling 339..426 CDD:238492 21/87 (24%)
MYSc 556..1317 CDD:214580 104/563 (18%)
MYSc_Myo18 575..1305 CDD:276837 99/539 (18%)
GBP_C <1540..1750 CDD:303769
COG1340 1565..1833 CDD:224259
coiled coil 1723..1734 CDD:293879
AgaP_AGAP000209XP_310924.4 PDZ 136..212 CDD:214570 24/133 (18%)
PDZ_signaling 231..310 CDD:238492 25/140 (18%)
PDZ_signaling 325..414 CDD:238492 27/121 (22%)
PDZ_signaling 496..561 CDD:238492 10/64 (16%)
PDZ_signaling 601..679 CDD:238492 10/77 (13%)
PDZ_signaling 844..925 CDD:238492
PDZ_signaling 983..1063 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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