DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhbp5 and CG16820

DIOPT Version :10

Sequence 1:NP_001303466.1 Gene:Jhbp5 / 41949 FlyBaseID:FBgn0038395 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_609627.1 Gene:CG16820 / 34730 FlyBaseID:FBgn0032495 Length:309 Species:Drosophila melanogaster


Alignment Length:275 Identity:57/275 - (20%)
Similarity:111/275 - (40%) Gaps:46/275 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 AKPPAKKADQLPSF-----------------------------LKVCHRNAPDLDTCVRESYEEL 59
            :.|..:.|.|.|||                             :..|..|:|||:.|:|...:..
  Fly    42 SSPVEELAAQTPSFSDSHVAVPSSSIDFAVAPASVTLSSGSNEVTPCSLNSPDLNECIRGLIQSF 106

  Fly    60 RPRL-MEGIPELYIPAMEPLVVPQVKMDQDSGAIYLHSVYRNVKVTGISKHTVNELRLEPSKLKF 123
            .|:| .:|:||..:.:::|....:......:..|....:.:|:::.|||:..||.:....:...|
  Fly   107 APKLRYQGVPEFNMDSIDPYFYKRGIFRYTNDGIQGGLLIKNMEIYGISQLQVNSVAANFTDNGF 171

  Fly   124 ILSL--TFPKL----HMESDYSIKVSREGKIMMMPLLGDGHCKVDLVNITMRTELIGQ-EYKKNG 181
            |:.|  ..|:|    |.::|...     |.:.::| .|..:..:|.:..|:.|:  |. |...:|
  Fly   172 IIKLGVELPQLKAGGHFKADVKF-----GGLRLVP-KGPFNITIDNIKATILTD--GHIEQLPSG 228

  Fly   182 ANFLKINTVKVKYELSDVHIHLDNLFNGDKALGDRMNEFLNENWKALAEEVRPLMTKALVDILRA 246
            ...|.::.:.....:.|..:..:.:|: |:.|...:...:|||...:.....|...:....||.|
  Fly   229 QQRLSLHRLNANVNIGDAKVVANGIFS-DRNLNAMILNLVNENLPEITRVGIPATREQWAPILIA 292

  Fly   247 SVDKLFASFSYDDLL 261
            .:::.||....:..|
  Fly   293 HINEFFAKVPIEKFL 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jhbp5NP_001303466.1 JHBP 28..262 CDD:461956 56/271 (21%)
CG16820NP_609627.1 JHBP 79..308 CDD:214779 51/238 (21%)

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