DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhbp5 and CG3246

DIOPT Version :10

Sequence 1:NP_001303466.1 Gene:Jhbp5 / 41949 FlyBaseID:FBgn0038395 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_608781.2 Gene:CG3246 / 33564 FlyBaseID:FBgn0031538 Length:445 Species:Drosophila melanogaster


Alignment Length:142 Identity:28/142 - (19%)
Similarity:54/142 - (38%) Gaps:32/142 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 TLSVDFMVSNNSALERLGMPVLRVNRLGLTFNPKLCITT-----------EESSRYTNVQRGAAD 154
            |:|:..::...||.|...:.:|...|..:.:.|:...|.           .::..|.:..:.||.
  Fly   294 TVSIGELLGAYSADEFRMLCLLSHYRSAIEYGPEAMGTARNVLRKFASFFSDAKAYIDGLKPAAY 358

  Fly   155 NFTACQGRAG-----------VLKECSSTPNGV--NGGLPDDCELI-------TGNLYVDGASNA 199
            :.|:.:...|           .||...:|.|.|  .|.|..:.:.|       |..:.:.|:||.
  Fly   359 DATSTESLLGKLSNTRTTVREFLKNDFNTANSVLALGELASNVQRIINSHEPSTSGVSLIGSSNV 423

  Fly   200 N-ITTKLQYVKE 210
            . :....:|::|
  Fly   424 GAVLAVTEYIRE 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jhbp5NP_001303466.1 JHBP 28..262 CDD:461956 28/142 (20%)
CG3246NP_608781.2 JHBP 31..246 CDD:214779
Grp7_allergen 260..418 CDD:319052 23/123 (19%)
Blue background indicates that the domain is not in the aligned region.

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