DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhbp4 and CG14258

DIOPT Version :10

Sequence 1:NP_650518.1 Gene:Jhbp4 / 41948 FlyBaseID:FBgn0038394 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_651531.1 Gene:CG14258 / 43260 FlyBaseID:FBgn0039482 Length:258 Species:Drosophila melanogaster


Alignment Length:260 Identity:64/260 - (24%)
Similarity:117/260 - (45%) Gaps:18/260 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KLAVSLSVFGSICLITVTHGA-YTREIVNDKLPLQERPSWLQTCKRSNPNEDKCFRQLFEGCFPA 72
            |:|..||:..  .|::...|| |          |.|:|.:|..|...:||.:.|..:.|:..|..
  Fly     4 KVAKFLSIVA--VLLSAVEGAKY----------LAEKPDFLIPCIVGDPNFNVCLTKNFQSFFRQ 56

  Fly    73 LAAGIPEI-GVKSFEPLNIDQVSVSK-GSGNLVLSGGFQDLVIRGPSNATVRRASLDLERRLLNF 135
            ...|||.. .|.||:|..|.:|..:: .|.::.::...:::.:.|...|.|..:|.|....:...
  Fly    57 WKDGIPGYNAVGSFDPFYIKRVKFTQDASRSIAINADLKEVYVAGAGQALVLESSWDPNHYVART 121

  Fly   136 ELELPRLRIRAKYNLKGNILLLPLVGSGDVAMALKNVHTTVYTRISLRNETRTGDEIIHIDEMKV 200
            .:.:|:||....|.:||::..|.|.|.|......:|  ..:...::::....:......:..:||
  Fly   122 LISVPKLRFNFDYKVKGHVSALNLNGHGKGYFEAEN--ALLLLELAVKPLATSDGYFADVQSVKV 184

  Fly   201 GF-DVGAMRIHLKNLFNGNEILAASINSFLNQNGKEVIAELRPDLELGLADIFHGLWNNVFSKMP 264
            .| ::...||.|:|||.||:.|..:.:...|:|.::....|||.:|..:..:....:...|..:|
  Fly   185 NFREIKQFRIKLENLFGGNKDLEDTAHILFNENWRDFFEVLRPAVEQTVGGVLLDRFKKTFVYVP 249

  Fly   265  264
              Fly   250  249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jhbp4NP_650518.1 JHBP 42..270 CDD:214779 55/226 (24%)
CG14258NP_651531.1 JHBP 26..255 CDD:214779 55/226 (24%)

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