DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hel89B and ETL1

DIOPT Version :10

Sequence 1:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_178318.1 Gene:ETL1 / 814740 AraportID:AT2G02090 Length:763 Species:Arabidopsis thaliana


Alignment Length:629 Identity:188/629 - (29%)
Similarity:296/629 - (47%) Gaps:151/629 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1313 KSDPLQARKTRDREFLDYLFNPKSIPNYKVPVPISVELRCYQQAGINWLWFLNKYNLHG-ILCDD 1376
            ::|...|.|..|.:|                .||   |:.||..|:|:|..|.|..:.| ||.|:
plant   195 QNDIDDACKAEDSDF----------------QPI---LKPYQLVGVNFLLLLYKKGIEGAILADE 240

  Fly  1377 MGLGKTLQTICILAGDHMHRQTANLANL-----PSLVICPPTLTGHWVYEVEKFLDQGSVLRPLH 1436
            ||||||:|.|..|         ..|:.|     |.||:||.::..:|..|:.|:....:||:   
plant   241 MGLGKTIQAITYL---------TLLSRLNNDPGPHLVVCPASVLENWERELRKWCPSFTVLQ--- 293

  Fly  1437 YYGFPVGREKLRSDIGT--------KCNLVVASY-------DTVRKDIDFFSGIHFNYCVLDEGH 1486
            |:|  ..|.....::.:        ..|:::..|       :..:.|........::..::||.|
plant   294 YHG--AARAAYSRELNSLSKAGKPPPFNVLLVCYSLFERHSEQQKDDRKVLKRWRWSCVLMDEAH 356

  Fly  1487 IIKNGKTKSSKAIKRL-----KANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSR 1546
            .:|:   |:|...|.|     .||.||:|:|||:||::.|||||.:|::|....||...:::   
plant   357 ALKD---KNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDIFTTENVDLKK--- 415

  Fly  1547 PILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKDLPPKITQDLLCELSPLQLRLY 1611
             :|::.|.:.        :..|:::   :.||:|||:|.||::.|.|||.:        ::..|.
plant   416 -LLNAEDTEL--------ITRMKSI---LGPFILRRLKSDVMQQLVPKIQR--------VEYVLM 460

  Fly  1612 EDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQAL--RYLQN-------VCNHPKLVLR--Q 1665
            |.......|:.:::...:|.|.:|..:..:...:.:||  |.:.|       :.|||.|:.|  .
plant   461 ERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAKALPKRQISNYFTQFRKIANHPLLIRRIYS 525

  Fly  1666 SEELTKVTSQLALSNS-----SLDDI------------------------------EH---SAKL 1692
            .|::.::..:|....:     |||.:                              :|   |||.
plant   526 DEDVIRIARKLHPIGAFGFECSLDRVIEEVKGFNDFRIHQLLFQYGVNDTKGTLSDKHVMLSAKC 590

  Fly  1693 PALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQD 1757
            ..|.:||       .:...|.||.|||.|..:||||:|..|   .:..|||.|||||...:.||.
plant   591 RTLAELL-------PSMKKSGHRVLIFSQWTSMLDILEWTL---DVIGVTYRRLDGSTQVTDRQT 645

  Fly  1758 IVNNFNSDPSIDVLLLTTMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYR 1822
            ||:.||:|.||...||:|..||.|||||||||||..:.|:||..|.||.||.|||||.|.|.::|
plant   646 IVDTFNNDKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFR 710

  Fly  1823 LITRNSLEEKIMGLQKFKILTANTVVSA-----ENASL--QTMG 1859
            |:|:::::|.|..:.|.|::....|:.:     :|...  :|||
plant   711 LVTKSTVDENIYEIAKRKLVLDAAVLESGVHVDDNGDTPEKTMG 754

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447
HepA <1342..1849 CDD:440319 179/581 (31%)
ETL1NP_178318.1 HepA <207..737 CDD:440319 180/598 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.