DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel89B and smarcad1a

DIOPT Version :10

Sequence 1:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_001018610.2 Gene:smarcad1a / 557875 ZFINID:ZDB-GENE-050522-499 Length:972 Species:Danio rerio


Alignment Length:568 Identity:195/568 - (34%)
Similarity:300/568 - (52%) Gaps:95/568 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1347 SVELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILAGDHMHRQTANLANLPSLVICP 1411
            :::|:.||..|:.||..|:::.|.|||.|:||||||:|.|..||  |::.:.   ...|.|:..|
Zfish   445 NLKLQAYQLIGLKWLILLHQHKLSGILADEMGLGKTIQAIAFLA--HLYEKG---IKGPHLITVP 504

  Fly  1412 PTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVGREKLRSDIGT---KCNLVVASYD-TVRKDID-- 1470
            .:...:||.|:..:...   |:.|.|||....|:.||.||.|   ..|::|::|: |:..|.|  
Zfish   505 SSTLDNWVRELGLWCPS---LKVLIYYGSVEDRKYLRQDILTGLIDFNIIVSTYNLTIGNDHDRS 566

  Fly  1471 FFSGIHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPG-FL 1534
            .|..:...|.|.||||::||..:...:.:..:.|.|||:|:|||:|||:|||.||.:|:||. |.
Zfish   567 LFRKLKLKYAVFDEGHMLKNMNSLRYRHLMTINAEHRLLLTGTPLQNNLLELMSLLNFIMPSMFS 631

  Fly  1535 GTEKQFVQRFSRPILSSRDAKSSAKEQEAGV-LAMEALHRQVLPFLLRRVKEDVLKDLPPKITQD 1598
            .:..|..:.||  ..||.:..|..|::.|.. |.|:       ||:|||||.:|||:||||:.:.
Zfish   632 SSTSQISKMFS--TRSSEEESSFHKDRIAQARLIMK-------PFILRRVKSEVLKELPPKMEKI 687

  Fly  1599 LLCELSPLQLRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVL 1663
            .:|.:|..|.:|| |...|.||...:  ||             |..:...:..|:.:.||| |:.
Zfish   688 EMCPMSDAQHKLY-DILFKRLKKTPN--GD-------------KRELCNVMMQLRKMANHP-LLH 735

  Fly  1664 RQ---SEELTKVTSQLALSNSSLDDIEHSAKLPAL-----------------------------K 1696
            ||   |::|.      |:|.:.|.:..|....|||                             |
Zfish   736 RQYYTSDKLA------AMSKAMLKEPTHYDADPALIQEDMEVMSDFELHNLCREYSSISGFQLEK 794

  Fly  1697 QLLLDCG-IGVQTESVSQ-----HRALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQR 1755
            .|:||.| ..:.|:::::     .|.::|.|...||||||  :|.:||.. .|:|||||.|.::|
Zfish   795 ALILDSGKFALLTKTLAKLKEKGDRVVLFSQFTMMLDIVE--ILLKHLDH-QYVRLDGSTPMAER 856

  Fly  1756 QDIVNNFNSDPSIDVLLLTTMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNV 1820
            ..:::.:|::|.|.|.||:|..||.|:||..|:|||..:.|.||..|.||.||.||:||.:.|.|
Zfish   857 IGLIDKYNTNPEIFVFLLSTRAGGQGINLASANTVILHDIDCNPFNDKQAEDRCHRMGQTRTVQV 921

  Fly  1821 YRLITRNSLEEKIM--GLQKFKILTANTVVSAENASLQTMGTSQIFDL 1866
            .:||:::|:|:.::  |.:|.|:....|....|:.::    |.|:.:|
Zfish   922 IKLISKDSIEDCMLRVGQEKLKLEQDMTTDEGEDGAI----TEQMAEL 965

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447
HepA <1342..1849 CDD:440319 191/549 (35%)
smarcad1aNP_001018610.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 15..76
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 125..177
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 217..333
ComEA <348..>381 CDD:441164
HepA <439..944 CDD:440319 189/541 (35%)
DEGH box 579..582 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.

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