DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp45 and Snapc1

DIOPT Version :9

Sequence 1:NP_650499.1 Gene:Pbp45 / 41920 FlyBaseID:FBgn0038371 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_848479.1 Gene:Snapc1 / 75627 MGIID:1922877 Length:389 Species:Mus musculus


Alignment Length:349 Identity:69/349 - (19%)
Similarity:129/349 - (36%) Gaps:76/349 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LVQRFQRLVNDGENCEFEVFCRCWRELQLQHLFTAQTNHTEVIATTLAALHVAKRLSCSRRTTGD 76
            |:.|||.:    ::..||.|...||.::...:|..:..:.:....|..||.:|.|.         
Mouse    33 LLSRFQEM----DSVRFEDFTELWRSMKFATIFCGKMRNLKKNMFTKEALALAWRY--------- 84

  Fly    77 VFPASRAQ-RIGGFFLLYVIYYKQPTHNFIKIEVSPRTWQELTDYALDLRKDSPERKDTHQIAYM 140
            ..|....| |:|..:|||.:|..|......||.|:.:.|.|:..:..||.  :.:..|.   |::
Mouse    85 FLPPHTFQIRVGALYLLYGLYNTQLCQPKQKIRVALKDWDEVIRFQQDLM--NAQHFDA---AFV 144

  Fly   141 LWRLTQEQAFRFTALDYCQGLDNLVDYDRVETVAGAKEQRQSALMQKQQRANGVSLTYELEGLRA 205
            ..:|..::||.|||:            .::.:....|:.:|:.:.||.:..|.          |.
Mouse   145 FRKLRLDRAFHFTAM------------PKLLSCRMKKKVQQTEVTQKFKDPND----------RV 187

  Fly   206 LDQASQPLCELEAAYNAQKKQLAAGHEHALPPSQIFGHLREVFADIQSVLGARKSTPDENCTTTS 270
            :...:..:  ||...|.        |:|              :.:::..:.|.||.||...:...
Mouse   188 MKLITSDV--LEEMLNV--------HDH--------------YQNMKHAISADKSMPDRALSLVK 228

  Fly   271 TGNQLEVRQRVRNKAMYGVEEREP------QNQADELEVQLEVNETYQRRMSSATV----FQREL 325
            ......::..|.....:..|.:.|      ::..:..|...|..|..:|.:|.|.:    |...:
Mouse   229 EDFFENIKNIVLEHQEWHKERKNPSLKPKLKDGEENGEGSSEEPERCERAVSLAKIKAKAFSAVV 293

  Fly   326 PADVQQEYEMIEF-SDDEEMEVGE 348
            |....:.:...:. |.|.:...|:
Mouse   294 PVSKSRRHRQSKLDSSDSDSGSGQ 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp45NP_650499.1 SNAPc_SNAP43 5..214 CDD:286846 45/202 (22%)
Snapc1NP_848479.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
SNAPC3-binding. /evidence=ECO:0000250 20..187 44/193 (23%)
SNAPc_SNAP43 26..210 CDD:286846 50/240 (21%)
SNAPC4-binding. /evidence=ECO:0000250 183..287 21/137 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 245..276 5/30 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 290..389 4/28 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850879
Domainoid 1 1.000 46 1.000 Domainoid score I12098
eggNOG 1 0.900 - - E1_KOG4746
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006114
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_107544
Panther 1 1.100 - - LDO PTHR15131
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3936
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.730

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