DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pbp45 and Snapc1

DIOPT Version :10

Sequence 1:NP_650499.1 Gene:Pbp45 / 41920 FlyBaseID:FBgn0038371 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_848479.1 Gene:Snapc1 / 75627 MGIID:1922877 Length:389 Species:Mus musculus


Alignment Length:351 Identity:69/351 - (19%)
Similarity:129/351 - (36%) Gaps:80/351 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LVQRFQRLVNDGENCEFEVFCRCWRELQLQHLFTAQTNHTEVIATTLAALHVAKRLSCSRRTTGD 76
            |:.|||.:    ::..||.|...||.::...:|..:..:.:....|..||.:|.|.         
Mouse    33 LLSRFQEM----DSVRFEDFTELWRSMKFATIFCGKMRNLKKNMFTKEALALAWRY--------- 84

  Fly    77 VFPASRAQ-RIGGFFLLYVIYYKQPTHNFIKIEVSPRTWQELTDYALDLRKDSPERKDTHQIAYM 140
            ..|....| |:|..:|||.:|..|......||.|:.:.|.|:..:..||.  :.:..|.   |::
Mouse    85 FLPPHTFQIRVGALYLLYGLYNTQLCQPKQKIRVALKDWDEVIRFQQDLM--NAQHFDA---AFV 144

  Fly   141 LWRLTQEQAFRFTALDYCQGLDNLVDYDRVETVAGAKEQRQSALMQKQQRANGVSLTYELEGLRA 205
            ..:|..::||.|||:            .::.:....|:.:|:.:.||.:..|             
Mouse   145 FRKLRLDRAFHFTAM------------PKLLSCRMKKKVQQTEVTQKFKDPN------------- 184

  Fly   206 LDQASQPLCE--LEAAYNAQKKQLAAGHEHALPPSQIFGHLREVFADIQSVLGARKSTPDENCTT 268
             |:..:.:..  ||...|.        |:|              :.:::..:.|.||.||...:.
Mouse   185 -DRVMKLITSDVLEEMLNV--------HDH--------------YQNMKHAISADKSMPDRALSL 226

  Fly   269 TSTGNQLEVRQRVRNKAMYGVEEREP------QNQADELEVQLEVNETYQRRMSSATV----FQR 323
            ........::..|.....:..|.:.|      ::..:..|...|..|..:|.:|.|.:    |..
Mouse   227 VKEDFFENIKNIVLEHQEWHKERKNPSLKPKLKDGEENGEGSSEEPERCERAVSLAKIKAKAFSA 291

  Fly   324 ELPADVQQEYEMIEF-SDDEEMEVGE 348
            .:|....:.:...:. |.|.:...|:
Mouse   292 VVPVSKSRRHRQSKLDSSDSDSGSGQ 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp45NP_650499.1 SNAPC1 5..214 CDD:430842 45/202 (22%)
Snapc1NP_848479.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
SNAPC3-binding. /evidence=ECO:0000250 20..187 45/197 (23%)
SNAPC1 26..210 CDD:430842 50/242 (21%)
SNAPC4-binding. /evidence=ECO:0000250 183..287 21/139 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 245..276 5/30 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 290..389 4/28 (14%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.