DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4520 and tomm40

DIOPT Version :10

Sequence 1:NP_650483.1 Gene:CG4520 / 41902 FlyBaseID:FBgn0038355 Length:320 Species:Drosophila melanogaster
Sequence 2:XP_017206807.1 Gene:tomm40 / 322645 ZFINID:ZDB-GENE-030131-1365 Length:360 Species:Danio rerio


Alignment Length:287 Identity:70/287 - (24%)
Similarity:118/287 - (41%) Gaps:23/287 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NPGNVQNLHILAHRVMPKFYDGIELDYLHRLAPNKYITAAWVLSH------IRPSGFRFGGLYTF 91
            |||..:..|.....|.|...:|:      ||..||.::..:.:||      :..||:|||..|..
Zfish    78 NPGTFEECHRKCKEVFPVQMEGV------RLVVNKGLSNHFQVSHTITLSTLGDSGYRFGSTYVG 136

  Fly    92 RVQDDTMYT-PTIMGDIHPTSLAANLNILYYPFQSLRMEAVLQKAREAAVESQYTIEWTRPCDTW 155
            ..|.....: |.::||:..|. :.|..:::.....:|.:..:|..:...|..|...|:..  |.:
Zfish   137 SKQTGPAESFPVMVGDMDNTG-SLNAQVIHQLTNRVRSKIAIQTQQHKFVNWQCDGEYRG--DDF 198

  Fly   156 TANFY----NVRNESGRCTMSVMRSVSAHWALGGELLLEWNDPQKLTPDLALAARYSHYNYSLAA 216
            ||...    :|...||......::|:|....|||||:......::.|. .:|..||:..||....
Zfish   199 TAAVTLGNPDVLVGSGILVAHYLQSLSPSLVLGGELVYHKRPGEEGTV-TSLVGRYTGSNYVATL 262

  Fly   217 TASRQGLDVTYWQRIHPHIQMANLLAWNRNTRKTIATICYQWNF--WNSAVHGMFDSDASVGFMW 279
            |....|...:|:.:.:..:|:......:...::|..:..||.:.  .|....|..||:..||...
Zfish   263 TVGGAGAHASYYHKANDQLQVGVEFEASTRMQETSVSFGYQLDVPKANLLFKGSLDSNWVVGATL 327

  Fly   280 TKYLTHLPLQMGFSVVMNLPTDRFAFG 306
            .|.|..|||.:.....:|...::|..|
Zfish   328 EKKLLPLPLSLALGAFLNHRKNKFQCG 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4520NP_650483.1 Porin3_Tom40 33..312 CDD:132766 70/287 (24%)
tomm40XP_017206807.1 Porin3_Tom40 76..360 CDD:132766 70/287 (24%)

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