Protein Alignment CG5213 and SNP1

DIOPT Version :9

• Sequence 1: NP_650473.1
• Gene: CG5213 / 41892
• FlyBaseID: FBgn0038345
• Length: 251
• Species: Drosophila melanogaster
• Sequence 2: NP_012203.1
• Gene: SNP1 / 854749
• SGDID: S000001323
• Length: 300
• Species: Saccharomyces cerevisiae
• Alignment Length: 257
• Identity: 52/257 - (20%)
• Similarity: 95/257 - (36%)
• Gaps: 68/257 - (26%)

  Fly    26 RPVDPP----PPLPNLRMKTNLI-------LNYLPQDMTESELHRLFS-KFGEIRKAKIIRHRRT 78
            ||.|.|    ...||:....||:       :...|:....:.|.|... |..:|:.|:::..|..
Yeast    26 RPTDYPYAKRQTNPNITGVANLLSTSLKHYMEEFPEGSPNNHLQRYEDIKLSKIKNAQLLDRRLQ 90

  Fly    79 GISCCYGFVDYVSERQAAAAVNGMDGYETRGKRLKVAFARPSEYESTSSSLYVGNLPTYMDEKKV 143
            ..:           ......:...|.|.|                     :::|.||..:||.::
Yeast    91 NWN-----------PNVDPHIKDTDPYRT---------------------IFIGRLPYDLDEIEL 123

  Fly   144 RELFATYGNIVDVNLLRHKFNNRSRGVAFLQFELVRDAEVA--KYGM-------DRYMIEGASRP 199
            ::.|..:|.|..:.:::.|...:|:|.||:.|:....:::|  :.|:       ||..|....|.
Yeast   124 QKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKDRICIVDIERG 188

  Fly   200 LTVKFVEREKKGSSSTSSGSQYKDKR---------KSSP------PPYKRRERTNDHHVSKR 246
            .|||:.:..:.|......|...:|.|         .|:|      |...|||.::..:.:.|
Yeast   189 RTVKYFKPRRLGGGLGGRGYSNRDSRLPGRFASASTSNPAERNYAPRLPRRETSSSAYSADR 250

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5213	NP_650473.1	RRM1_Hu_like	41..117	CDD:240821	12/83 (14%)
		RRM	128..202	CDD:214636	20/82 (24%)
SNP1	NP_012203.1	U1snRNP70_N	6..95	CDD:403437	15/79 (19%)
		RRM_SNP1_like	89..201	CDD:410194	26/143 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910