Protein Alignment maca and Pabpc5

DIOPT Version :10

• Sequence 1: NP_650473.1
• Gene: maca / 41892
• FlyBaseID: FBgn0038345
• Length: 251
• Species: Drosophila melanogaster
• Sequence 2: NP_001103836.1
• Gene: Pabpc5 / 688518
• RGDID: 1587661
• Length: 382
• Species: Rattus norvegicus
• Alignment Length: 153
• Identity: 40/153 - (26%)
• Similarity: 80/153 - (52%)
• Gaps: 4/153 - (2%)

  Fly    39 MKTNLILNYLPQDMTESELHRLFSKFGEIRKAKIIRHRRTGISCCYGFVDYVSERQAAAAVNGMD 103
            :|..|.:..|..|:||..|::.|...|.:|..:|.|...|.....||:|::.....|..|:|.|:
  Rat    16 LKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMN 80

  Fly   104 GYETRGKRLKVAFARPSEY--ESTSSSLYVGNLPTYMDEKKVRELFATYGNIVDVNLLRHKFNNR 166
            .....||..::.:::|.::  :|...::::.||...:|.:.:..||:.:|||:...::..  :|.
  Rat    81 FDLINGKPFRLMWSQPDDHLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNG 143

  Fly   167 SRGVAFLQFELVRDAEVAKYGMD 189
            |:|.|::.|:.:..|..|.:.|:
  Rat   144 SKGYAYVHFDSLAAANRAIWHMN 166

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
maca	NP_650473.1	sex-lethal	<41..>210	CDD:273740	39/151 (26%)
Pabpc5	NP_001103836.1	PABP-1234	22..>379	CDD:130689	38/147 (26%)