Protein Alignment maca and Pabpc6

DIOPT Version :10

• Sequence 1: NP_650473.1
• Gene: maca / 41892
• FlyBaseID: FBgn0038345
• Length: 251
• Species: Drosophila melanogaster
• Sequence 2: NP_001157308.1
• Gene: Pabpc6 / 67543
• MGIID: 1914793
• Length: 643
• Species: Mus musculus
• Alignment Length: 222
• Identity: 55/222 - (24%)
• Similarity: 96/222 - (43%)
• Gaps: 38/222 - (17%)

  Fly    41 TNLILNYLPQDMTESELHRLFSKFGEIRKAKIIRHRRTGISCCYGFVDYVSERQAAAAVNGMDGY 105
            ||:.:..|.:||.:..|..||.:||.....|::.. .:|.|..:|||.:.....|..||..|:|.
Mouse   191 TNVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTD-ESGKSKGFGFVSFERHEDARKAVEEMNGK 254

  Fly   106 ETRGKRLKVAFARPSEYEST----------------------------SSSLYVGNLPTYMDEKK 142
            :..||::.|..|:......|                            ..:|||.||...:|:::
Mouse   255 DLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKHKIERVPQDRSVRCKGVNLYVKNLDDGIDDER 319

  Fly   143 VRELFATYGNIVDVNLLRHKFNNRSRGVAFLQFELVRDAEVAKYGMDRYMIEGASRPLTVKFVER 207
            :|:.|:.:|.|....:...  ..||:|..|:.|....:|..|...|:..::  |::||.|...:|
Mouse   320 LRKEFSPFGTITSAKVTME--GGRSKGFGFVCFSSPEEATKAVTEMNGKIV--ATKPLYVALAQR 380

  Fly   208 EKKGSSSTSSGSQYKDKRKSS---PPP 231
            :::..:..|  :||..:..|:   |.|
Mouse   381 KEERQAHLS--NQYMQRMASTSAGPNP 405

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
maca	NP_650473.1	sex-lethal	<41..>210	CDD:273740	49/196 (25%)
Pabpc6	NP_001157308.1	PABP-1234	11..622	CDD:130689	55/222 (25%)