DRSC/TRiP Functional Genomics Resources

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Protein Alignment maca and Spx

DIOPT Version :10

Sequence 1:NP_650473.1 Gene:maca / 41892 FlyBaseID:FBgn0038345 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_511058.1 Gene:Spx / 31558 FlyBaseID:FBgn0015818 Length:347 Species:Drosophila melanogaster


Alignment Length:192 Identity:44/192 - (22%)
Similarity:93/192 - (48%) Gaps:7/192 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 PLPNLRMKTNLILNYLPQDMTESELHRLFSKFGEIRKAKIIRHRRTGISCCYGFVDYVSERQAAA 97
            |:........:....|...::|:.|..||.:.|.:....:.:.|.|.:...||||:::||..|..
  Fly     5 PIAERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69

  Fly    98 AVNGMDGYETRGKRLKVAFARPSEYE-STSSSLYVGNLPTYMDEKKVRELFATYGNIVDV-NLLR 160
            .:..|:..:..||.::|..|...:.. ...:::::|||...:|||.:.:.|:.:|.|:.. .::|
  Fly    70 GIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMR 134

  Fly   161 HKFNNRSRGVAFLQFELVRDAEVAKYGMD-RYMIEGASRPLTVKFV-EREKKGSSSTSSGSQ 220
            .....:|:..||:.|.....::.|...|: :|:   .:||::|.:. :::.||....|:..:
  Fly   135 DPETGKSKSFAFINFASFEASDAAMDAMNGQYL---CNRPISVSYAFKKDHKGERHGSAAER 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
macaNP_650473.1 sex-lethal <41..>210 CDD:273740 40/172 (23%)
SpxNP_511058.1 RRM1_SF3B4 15..88 CDD:409771 19/72 (26%)
RRM2_SF3B4 99..181 CDD:409772 20/84 (24%)

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