Protein Alignment maca and Pabpc4l

DIOPT Version :10

• Sequence 1: NP_650473.1
• Gene: maca / 41892
• FlyBaseID: FBgn0038345
• Length: 251
• Species: Drosophila melanogaster
• Sequence 2: NP_001099899.1
• Gene: Pabpc4l / 295010
• RGDID: 1559517
• Length: 370
• Species: Rattus norvegicus
• Alignment Length: 188
• Identity: 48/188 - (25%)
• Similarity: 89/188 - (47%)
• Gaps: 27/188 - (14%)

  Fly    37 LRMK----TNLILNYLPQDMTESELHRLFSKFGEIRKAKIIRHRRTGISCCYGFVDYVSERQAAA 97
            ||.|    ||:.:.....||.:..|..:|||:|:....|:::. .:|.|..:|||.:.|.:.|..
  Rat   182 LREKPAEFTNVYIKNFGDDMDDESLRSVFSKYGQTLSVKVMKD-ASGKSKRFGFVSFDSHKAAKN 245

  Fly    98 AVNGMDGYETRGKRLKVAFA-----RPSEYES-------------TSSSLYVGNLPTYMDEKKVR 144
            ||..|:|.:..|:.:.|..|     |.:|.:.             .::.||:.||...:|::.:|
  Rat   246 AVEDMNGRDINGQTIFVGRAQKKVERQAELKEMFEQMKKERIRARQAAKLYIKNLDDTIDDETLR 310

  Fly   145 ELFATYGNIVDVNLLRHKFNNRSRGVAFLQFELVRDAEVAKYGMDRYMIEGASRPLTV 202
            :.|:.:|:|..|.:::..  .:|:|...:.|.....|..|...|:..::  .|:||.:
  Rat   311 KEFSVFGSICRVKVMQEA--GQSKGFGLICFFSPEAAAKAMAEMNGRIL--GSKPLNI 364

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
maca	NP_650473.1	sex-lethal	<41..>210	CDD:273740	45/180 (25%)
Pabpc4l	NP_001099899.1	PABP-1234	10..>369	CDD:130689	48/188 (26%)