Protein Alignment CG5213 and Elavl3

DIOPT Version :9

• Sequence 1: NP_650473.1
• Gene: CG5213 / 41892
• FlyBaseID: FBgn0038345
• Length: 251
• Species: Drosophila melanogaster
• Sequence 2: NP_034617.1
• Gene: Elavl3 / 15571
• MGIID: 109157
• Length: 367
• Species: Mus musculus
• Alignment Length: 229
• Identity: 81/229 - (35%)
• Similarity: 123/229 - (53%)
• Gaps: 22/229 - (9%)

  Fly    32 PPLPNLRM----------KTNLILNYLPQDMTESELHRLFSKFGEIRKAKIIRHRRTGISCCYGF 86
            |.|||..:          |||||:|||||:||:.|...||...|:|...|::|.:.||.|..|||
Mouse    20 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGF 84

  Fly    87 VDYVSERQAAAAVNGMDGYETRGKRLKVAFARPSEYESTSSSLYVGNLPTYMDEKKVRELFATYG 151
            |:|.....|..|:|.::|.:.:.|.:||::||||......::|||..||..|.:|::.:||:.||
Mouse    85 VNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYG 149

  Fly   152 NIVDVNLLRHKFNNRSRGVAFLQFELVRDAEVAKYGMDRYMIEGASRPLTVKFVER--EKKGSSS 214
            .|:...:|..:....||||.|::|:...:||.|..|::.....||:.|:||||...  :|.|.:.
Mouse   150 RIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQAL 214

  Fly   215 TSSGSQYKDKRKSSPPPYKRRERTNDHHVSKRSR 248
            .:...|...:|.:.|.          ||.::|.|
Mouse   215 LTHLYQSSARRYAGPL----------HHQTQRFR 238

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5213	NP_650473.1	RRM1_Hu_like	41..117	CDD:240821	33/75 (44%)
		RRM	128..202	CDD:214636	26/73 (36%)
Elavl3	NP_034617.1	ELAV_HUD_SF	36..366	CDD:273741	77/213 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000313
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910