DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment obe and AT3G28870

DIOPT Version :10

Sequence 1:NP_650472.2 Gene:obe / 41891 FlyBaseID:FBgn0038344 Length:2183 Species:Drosophila melanogaster
Sequence 2:NP_189529.1 Gene:AT3G28870 / 822521 AraportID:AT3G28870 Length:355 Species:Arabidopsis thaliana


Alignment Length:349 Identity:76/349 - (21%)
Similarity:120/349 - (34%) Gaps:102/349 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1872 NEDKHNE-------EMAEVSRFRP-----PSSSWDSSYTKTFLL--LQAHFARQSL-PNSDYLTD 1921
            |.||..|       :|....|.|.     |....::....|.||  |:....|..| ..::...|
plant    57 NADKQEENPNLNDPKMRPRIRIRSKLVDNPKDRLEAKQKLTELLKALEERLTRSELRVYTNLCKD 121

  Fly  1922 TKSALDNATRVMQAMVDYTAERGWLSTTLVVQQLMQSVIQARWFDGSEFLTLPGVNEDNL---DA 1983
            .||.:....:..:|:   |..:|..:.|.:.:.:.      :|             ||.:   |.
plant   122 LKSQIAYGDKEDEAV---TRVKGHKNLTDIEEDMY------KW-------------EDEMFEVDM 164

  Fly  1984 FLNIPHDDYDYLTLPV--LKELCKQEYEVLAKPLRDAF----EEHEIEKMYKVIQD-----LPEI 2037
            .:.:       ||..|  .||:.|.|.|:  |.|...|    |....|.|::.:.:     ||.|
plant   165 LMRV-------LTSAVESAKEVIKGEMEL--KDLGAKFYRCVEMLYGEDMFETVTEDHQRALPMI 220

  Fly  2038 AIQIFVEGRHMENEYAK-RPL------SLSDDTRGEWMSLHANEDYVLIVNLQRLNVSGQRRGGG 2095
            ..::..:.||:.....: :||      .||.:.||..:|...|.:.||                 
plant   221 LSRLKQKLRHVTTARERLKPLWKQTIEKLSTNQRGSTISSEDNNNLVL----------------- 268

  Fly  2096 QSYTVHCPKYPKPKNEAWFLTLGSQANDELLAMKRVSIR---GQ--RCTNRISFQATPRLGRLQL 2155
                 .|....||..::..:..|      |.|....|:.   ||  :...::.|......|....
plant   269 -----ECNFISKPDGDSGHVGAG------LYASAAPSLHKGLGQELKAKVKLDFTVPSEPGEKSY 322

  Fly  2156 TLYLMSDCLMGFDQQYDLQFEIID 2179
            |||.|.|..:|.||:|  .|.:.|
plant   323 TLYFMCDSYLGCDQEY--SFSVDD 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obeNP_650472.2 Helicase_PWI <247..>284 CDD:436309
BRR2 485..1025 CDD:440817
DEXHc_ASCC3_1 486..683 CDD:350778
SEC63 985..1298 CDD:214744
BRR2 1334..1859 CDD:440817
DEXHc_ASCC3_2 1336..1525 CDD:350780
SEC63 1818..2176 CDD:214744 74/344 (22%)
AT3G28870NP_189529.1 Sec63 8..342 CDD:214946 75/345 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.