DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment obe and Helq

DIOPT Version :10

Sequence 1:NP_650472.2 Gene:obe / 41891 FlyBaseID:FBgn0038344 Length:2183 Species:Drosophila melanogaster
Sequence 2:XP_006534885.1 Gene:Helq / 191578 MGIID:2176740 Length:1141 Species:Mus musculus


Alignment Length:1015 Identity:215/1015 - (21%)
Similarity:386/1015 - (38%) Gaps:265/1015 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 DEEAEDDPNCAVAVSVQQLRMQHQRKLLEAAQREPLLLS---TKAAKAEYKQSSYNQPI--HYPY 414
            |..||.:|...::..|...::.:    .|..|..|..|.   ||....:.::||:.:.:  |...
Mouse   214 DVPAEPEPGSDLSFDVPSSQILY----FENPQNSPEALGDPCTKKTNGDPQKSSHEELVSSHTEQ 274

  Fly   415 VFDSQLLAKQHAGFIGGSRITLPDN--AQRIDNKQWEEVKIPASE-------PPPLSVGNKRVQI 470
            ...:...:...|......|.:|.|:  :....|.:.:....|.|:       ...:||..|.:: 
Mouse   275 PEPNNDFSNVRAASESSRRKSLKDHLKSTMAGNARAQTPAFPRSKHLREALLSEEISVAKKAIE- 338

  Fly   471 EELDDVG---------RLAFANCKELNRI---QSVVFPV-AYHSNENMLVCAPTGAGKTNVAMLS 522
            ...||:|         |..:...|.:.::   |.....: :....:|::...||..|||.||.:.
Mouse   339 SPSDDLGPFYSLPSKVRDLYVQLKGIKKLYDWQHTCLTLRSVQERKNLIYSLPTSGGKTLVAEIL 403

  Fly   523 IVHTIRCHLEQGVINRDEFKIVYIAPMKALAAEMVDNFS-------------------------K 562
            ::..:.|..:.         ::.|.|..|:..|.:.:.|                         :
Mouse   404 MLQELLCRQKD---------VLMILPYVAIVQEKISSLSSFGIELGFFVEEYAGSKGRFPPIKRR 459

  Fly   563 RLKSLQIAVRELTGDIQLTKAEMAATQILVTTPEKWDVVTRKGSGDVALISLVELLIIDEVHLL- 626
            ..|||.||..|        ||......::.|                :.:|.:.|:::||:|:: 
Mouse   460 EKKSLYIATIE--------KAHSLVNALIET----------------SRLSTLGLVVVDELHMIG 500

  Fly   627 HGERGPVVEALVARTLRLVESSQSMIRIVGLSATLPNYIDVAHFLRVNPMKGLFYFDSRFRPVPL 691
            .|.||.::|..:|:.|...:::|    |:|:||||.|..|:..||:..      |:.|:||||.|
Mouse   501 EGSRGAILEMTLAKVLYTSKTTQ----IIGMSATLNNVEDLQAFLKAE------YYTSQFRPVEL 555

  Fly   692 -------DT------------NFVGIKSVKQLQQIADMDQCCYQKCVEMVQE---GHQIMVFVHA 734
                   ||            .|..:.|.|..:.:..||.   .:.|.:|.|   .:..:||..:
Mouse   556 KEFLKVNDTIYEVDSQAADGMTFSRLLSYKYSEALKKMDP---DRLVALVTEVIPNYSCLVFCPS 617

  Fly   735 RNATVRTANVIRELAQQNNTSALFLPKDSAAHGLATRSIQRSRNKQLVELFS----------C-- 787
            :.   ...||...|.:       ||.||...|          |.|:..|:..          |  
Mouse   618 KK---NCENVAEMLCK-------FLSKDYLNH----------REKEKCEVIKSLRNIGNGKVCPV 662

  Fly   788 -------GLAMHHAGMLRADRQMVEKYFVEGHISVLVCTATLAWGVNLPAHAVIIRGTDIYDA-- 843
                   |:|.||:|:...:|:::|:.:..|.:.:|.||:|||.||||||..||:|...:.:.  
Mouse   663 LKRTVPFGIAYHHSGLTSEERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYVANTFL 727

  Fly   844 KHGSFVDLGILDVLQIFGRAGRPQFDKSGVGTIITSYDKLNHYLSLLTNQFPIE---SNFVNCLA 905
            |...:        .|:.|||||...|.:|...::.........|.|::.  |:|   |:.|....
Mouse   728 KRNQY--------KQMVGRAGRAGIDTAGESILLLQEKDKQQVLELISG--PLETCCSHLVEEFT 782

  Fly   906 DNLNA----EIGLGTITNVDEAIEWLSYTYLFVRMRI---NPHVYGIEYSELEKDPTLEARRRAL 963
            ..:.|    .|||....::.:..:::|.|:..|:.:|   ...::.|....||     ....:.|
Mouse   783 KGIQALFLSLIGLKIAASLGDIYQFMSGTFFGVQQKILLKEKSLWEITVDALE-----HLTEKGL 842

  Fly   964 IMSAAMSLDKARMMRFNQRTMDMNITDLGRTASY---FYIKY-DTVETFNELMKP---------- 1014
            :...:...::.....|       .||.||: ||:   ..:.| ||:  :.:|.|.          
Mouse   843 LQKDSCGDNEGLECHF-------RITKLGQ-ASFKGAIDLAYCDTL--YRDLKKGLEGLVLESLL 897

  Fly  1015 ---FMTQAEILAMISQA------QEFQQLKVRDDEMEELDELKNAYCKIKPYGGSENVHGKV--N 1068
               ::|....||..|:.      ::|.||...:..:..|..:..::...|..|  :.|..||  |
Mouse   898 HLIYLTTPYDLAAQSEPDWMVYFKQFGQLSPTEQNVAALLGVSESFIGKKAAG--QAVRKKVDKN 960

  Fly  1069 ILIQTYLSNGYVKSFSLSSDMSYITTNIGRISRALFSIV------LRQNNAVLSGNMLQLCKMFE 1127
            ::.:.||      ||.|.|.:.  .||:..:|.. |::.      |....|..|..:|..|:..|
Mouse   961 VVNRLYL------SFVLYSLLK--ETNVWSVSEK-FNLPRGYIQNLLMGAASFSSCVLHFCEELE 1016

  Fly  1128 RRQWDFDCHLKQFP-----TINAETIDKLERRGLSVYRLRDMEHRELKEWLR-SNTYADLVIR-- 1184
             ..|.:...|.:..     .:.||.|..:|..|:...|.:.:.:...:..:. :|...:::::  
Mouse  1017 -EFWVYKALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYNAGYRSIMHLANANPEVLVKTI 1080

  Fly  1185 ------------SAHELPLLEVEASLQPITRTVLRIKVDI 1212
                        |:.::.|.|...:||.....:||:..|:
Mouse  1081 DHLSRRQARQIVSSAKMLLHEKAEALQGEAEELLRLPADL 1120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obeNP_650472.2 Helicase_PWI <247..>284 CDD:436309
BRR2 485..1025 CDD:440817 143/639 (22%)
DEXHc_ASCC3_1 486..683 CDD:350778 47/226 (21%)
SEC63 985..1298 CDD:214744 58/279 (21%)
BRR2 1334..1859 CDD:440817
DEXHc_ASCC3_2 1336..1525 CDD:350780
SEC63 1818..2176 CDD:214744
HelqXP_006534885.1 PHA03307 35..>327 CDD:223039 21/116 (18%)
BRR2 350..917 CDD:440817 145/657 (22%)
DEXHc_POLQ-like 350..552 CDD:350784 51/244 (21%)
HHH_5 1043..1096 CDD:434010 5/52 (10%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.