Protein Alignment Rh6 and valopb

DIOPT Version :10

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Sequence 2: NP_001103750.1
• Gene: valopb / 560921
• ZFINID: ZDB-GENE-040724-41
• Length: 392
• Species: Danio rerio
• Alignment Length: 328
• Identity: 84/328 - (25%)
• Similarity: 158/328 - (48%)
• Gaps: 31/328 - (9%)

  Fly    19 SLAESVPAEIMHMVDPYWYQWPPLEPMWFGIIGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSN 83
            |:.||  .::....||:......:.|..:..:..::.|:.::|:..||.||.:....|.||.|.|
Zfish     7 SVTES--TDVTTPDDPFKGPLKSVAPWNYTFLACLMFIVTSLSITENFTVMLVTYRFKQLRKPLN 69

  Fly    84 MFVVNLAFSDFMMMFTMFPPVVLNGFYGTWIMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCV 148
            ..:|||:.:||::..|......|....|.:.:|.:.|.|.|...:.||.|::||:.::|::|:.|
Zfish    70 YIIVNLSVADFLVSMTGGTISFLTNARGFFFLGVWACVLEGFAVTFFGIVALWSLAILAFERFFV 134

  Fly   149 IVKGMARKPLTATAAVLRLMVVWTICGAWALMPLFGWNRYVPEGNMTACGTDYFAKDWWNRSYII 213
            |.:.:....|....|.:.|:.|||....|.:.|:.|||.|......|.|..::::.::::.:|||
Zfish   135 ICRPLKNVRLGGKHAAMGLIFVWTFSFIWTIPPVLGWNSYTVSKIGTTCEPNWYSTNYYDHTYII 199

  Fly   214 VYSLWVYLTPLLTIIFSYWHIMKAVAAHEKAMREQAKKMNVASLRNSEADKSKAIEIKLAKVALT 278
            .:.:..::.||..||.||..:|              :|:...|..:.....::..:.::|::.:.
Zfish   200 TFFVTCFILPLGVIIISYGKLM--------------QKLRKVSNTHGRLGNARKPDREVARMVVV 250

  Fly   279 TISLWFFAWTPYTIINYAGIFESMHLSPLSTI-----CGSV---FAKANAVCNPIVYGLSHPKYK 335
            .|..:...||||...       |:.::...||     .||:   |:|..||.|||:|...:.:::
Zfish   251 MIVAFMVGWTPYAAF-------SITVTACPTIYIDPRLGSIPAFFSKTAAVYNPIIYVFMNKQFR 308

  Fly   336 QVL 338
            :.|
Zfish   309 KCL 311

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	77/297 (26%)
		TM helix 1	49..75	CDD:320207	6/25 (24%)
		TM helix 2	82..108	CDD:320207	8/25 (32%)
		TM helix 3	120..150	CDD:320207	11/29 (38%)
		TM helix 4	161..181	CDD:320207	6/19 (32%)
		TM helix 5	208..237	CDD:320207	10/28 (36%)
		TM helix 6	267..297	CDD:320207	6/29 (21%)
		TM helix 7	306..331	CDD:320207	12/32 (38%)
valopb	NP_001103750.1	7tmA_VA_opsin	21..311	CDD:320210	78/310 (25%)
		TM helix 1	35..61	CDD:320210	6/25 (24%)
		TM helix 2	68..95	CDD:320210	8/26 (31%)
		TM helix 3	106..136	CDD:320210	11/29 (38%)
		TM helix 4	149..167	CDD:320210	6/17 (35%)
		TM helix 5	194..224	CDD:320210	10/43 (23%)
		TM helix 6	239..269	CDD:320210	7/36 (19%)
		TM helix 7	279..304	CDD:320210	10/24 (42%)