Protein Alignment Rh6 and Rh3

DIOPT Version :10

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Sequence 2: NP_524411.1
• Gene: Rh3 / 42398
• FlyBaseID: FBgn0003249
• Length: 383
• Species: Drosophila melanogaster
• Alignment Length: 356
• Identity: 123/356 - (34%)
• Similarity: 204/356 - (57%)
• Gaps: 10/356 - (2%)

  Fly    20 LAESVPAEIMHMVDPYWYQWP-PLEPMWFGIIGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSN 83
            |..:||.|.:..:..:|..:| |.|.|.: ::|.:......||:.||.:|:::|:::|.||||||
  Fly    31 LGWNVPPEELRHIPEHWLTYPEPPESMNY-LLGTLYIFFTLMSMLGNGLVIWVFSAAKSLRTPSN 94

  Fly    84 MFVVNLAFSDFMMMFTMFPPVVLNGFYGTWIMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCV 148
            :.|:||||.||||| ...|..:.|.|:..:.:|...|:::|:.||..|..:..:...|||||:.|
  Fly    95 ILVINLAFCDFMMM-VKTPIFIYNSFHQGYALGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNV 158

  Fly   149 IVKGMARKPLTATAAVLRLMVVWTICGAWALMPLF-GWNRYVPEGNMTACGTDYFAKDWWNRSYI 212
            |.:.|..| :|...|:..::.::.....|.:.... .|.|:||||.:|:|..||...::..|.::
  Fly   159 ITRPMEGK-MTHGKAIAMIIFIYMYATPWVVACYTETWGRFVPEGYLTSCTFDYLTDNFDTRLFV 222

  Fly   213 IVYSLWVYLTPLLTIIFSYWHIMKAVAAHEKAMREQAKKMNVASLRNSEADKSK-AIEIKLAKVA 276
            .....:.::.|...|.:.|..|:..|.:||||:|:|||||||.||| |..||:| ..||::||.|
  Fly   223 ACIFFFSFVCPTTMITYYYSQIVGHVFSHEKALRDQAKKMNVESLR-SNVDKNKETAEIRIAKAA 286

  Fly   277 LTTISLWFFAWTPYTIINYAGIF-ESMHLSPLSTICGSVFAKANAVCNPIVYGLSHPKYKQVLRE 340
            :|...|:|.:||||.:::..|.| :...|:|.:|:..:...|..|..:|.||.:|||:|:..|::
  Fly   287 ITICFLFFCSWTPYGVMSLIGAFGDKTLLTPGATMIPACACKMVACIDPFVYAISHPRYRMELQK 351

  Fly   341 KMPCLACGK--DDLTSDSRTQATAEISESQA 369
            :.|.||..:  .:.::.:.|..|.|..::.|
  Fly   352 RCPWLALNEKAPESSAVASTSTTQEPQQTTA 382

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	106/292 (36%)
		TM helix 1	49..75	CDD:320207	7/25 (28%)
		TM helix 2	82..108	CDD:320207	13/25 (52%)
		TM helix 3	120..150	CDD:320207	11/29 (38%)
		TM helix 4	161..181	CDD:320207	2/19 (11%)
		TM helix 5	208..237	CDD:320207	5/28 (18%)
		TM helix 6	267..297	CDD:320207	12/29 (41%)
		TM helix 7	306..331	CDD:320207	7/24 (29%)
Rh3	NP_524411.1	7tmA_photoreceptors_insect	59..349	CDD:320207	106/293 (36%)
		TM helix 1	60..86	CDD:320207	7/25 (28%)
		TM helix 2	93..118	CDD:320207	13/25 (52%)
		TM helix 3	130..160	CDD:320207	11/29 (38%)
		TM helix 4	170..190	CDD:320207	2/19 (11%)
		TM helix 5	218..247	CDD:320207	5/28 (18%)
		TM helix 6	277..307	CDD:320207	12/29 (41%)
		TM helix 7	317..342	CDD:320207	7/24 (29%)