Protein Alignment Rh6 and exorh

DIOPT Version :10

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Sequence 2: NP_571287.1
• Gene: exorh / 30459
• ZFINID: ZDB-GENE-991229-12
• Length: 354
• Species: Danio rerio
• Alignment Length: 367
• Identity: 94/367 - (25%)
• Similarity: 177/367 - (48%)
• Gaps: 36/367 - (9%)

  Fly     7 PSFAYMRDGRNLSLAESVPAEIMHMVDPYWYQWPPLEPMWFGIIG--FVIAILGTMSLAGNFIVM 69
            |:| |:.......|..| |.|     :|.:|.   .||..|.::.  .:..|||:..:  |.:.:
Zfish     7 PNF-YVPMSNRTGLVRS-PFE-----EPQYYL---AEPWQFSLLAAYMLFLILGSFPI--NALTL 59

  Fly    70 YIFTSSKGLRTPSNMFVVNLAFSDFMMMFTMFPPVVLNGFYGTWIMGPFLCELYGMFGSLFGCVS 134
            |:....|.||||.|..::|||.:|..|:...|...:....:|.:::|...|.:.|.|.:|.|.::
Zfish    60 YVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTVTLYTALHGYFLLGVTGCNIEGFFATLGGEIA 124

  Fly   135 IWSMTLIAYDRYCVIVKGMARKPLTATAAVLRLMVVWTICGAWALMPLFGWNRYVPEGNMTACGT 199
            :||:.::|.:||.|:.|.|:........|::.:...|.:....|:.||.||:||:|||...:||.
Zfish   125 LWSLVVLAIERYIVVCKPMSTFRFGEKHAIIGVGFTWVMALTCAVPPLLGWSRYIPEGMQCSCGI 189

  Fly   200 DYFA--KDWWNRSYIIVYSLWVYLTPLLTIIFSYWHIMKAVAAHEKAMREQAKKMNVASLRNSEA 262
            ||:.  .:..|.|::|...:..:..|||.|.|.|..::..|.|              |:.:..|:
Zfish   190 DYYTPKPEVHNTSFVIYMFILHFSIPLLIIFFCYSRLLCTVRA--------------AAAQQQES 240

  Fly   263 DKSKAIEIKLAKVALTTISLWFFAWTPYTIINYAGIF--ESMHLSPLSTICGSVFAKANAVCNPI 325
            :.::..|.::.::.:..:..:...|.||..:.:. ||  :.....|:.....:.|||:.|:.||:
Zfish   241 ETTQRAEREVTRMVVVMVIAFLVCWVPYASVAWY-IFANQGAEFGPVFMTVPAFFAKSAALYNPV 304

  Fly   326 VYGLSHPKYKQVLREKMPCLACGKDDLTSDSRTQATAEISES 367
            :|.:.:.:::..:   :..:.|||:.|..|..:.|.:..::|
Zfish   305 IYIMLNRQFRNCM---LSTVCCGKNPLAEDESSSAVSSKTQS 343

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	75/295 (25%)
		TM helix 1	49..75	CDD:320207	5/27 (19%)
		TM helix 2	82..108	CDD:320207	7/25 (28%)
		TM helix 3	120..150	CDD:320207	11/29 (38%)
		TM helix 4	161..181	CDD:320207	3/19 (16%)
		TM helix 5	208..237	CDD:320207	9/28 (32%)
		TM helix 6	267..297	CDD:320207	4/29 (14%)
		TM helix 7	306..331	CDD:320207	8/24 (33%)
exorh	NP_571287.1	Rhodopsin_N	3..37	CDD:313611	11/39 (28%)
		7tmA_MWS_opsin	38..317	CDD:381742	75/295 (25%)
		TM helix 1	39..65	CDD:381742	5/27 (19%)
		TM helix 2	72..99	CDD:381742	7/26 (27%)
		TM helix 3	110..140	CDD:381742	11/29 (38%)
		TM helix 4	151..173	CDD:381742	4/21 (19%)
		TM helix 5	200..230	CDD:381742	9/29 (31%)
		TM helix 6	245..275	CDD:381742	4/30 (13%)
		TM helix 7	285..310	CDD:381742	8/24 (33%)