Protein Alignment Rh6 and Hrh2

DIOPT Version :10

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Sequence 2: NP_001399940.1
• Gene: Hrh2 / 25461
• RGDID: 2831
• Length: 402
• Species: Rattus norvegicus
• Alignment Length: 303
• Identity: 81/303 - (26%)
• Similarity: 137/303 - (45%)
• Gaps: 27/303 - (8%)

  Fly    50 IGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMMMFTMFPPVVLNGFYGTWI 114
            |..|:..|..:::|||.:|....:.::.||:.:|.|:|:||.:|.::...:.|...:......|.
  Rat    21 ISVVLTTLILITIAGNVVVCLAVSLNRRLRSLTNCFIVSLAATDLLLGLLVLPFSAIYQLSFKWS 85

  Fly   115 MGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCVIVKGMARKP--LTATAAVLRLMVVWTICGAW 177
            .|...|.:|.....:....||.::.:|:.||||.:...: |.|  :|.....:.|:.:|.|....
  Rat    86 FGHVFCNIYTSLDVMLCTASILNLFMISLDRYCAVTDPL-RYPVLVTPVRVAISLVFIWVISITL 149

  Fly   178 ALMPL-FGWNRYVPEGNMTACGTDYF-AKDWWNRSYIIVYSLWVYLTPLLTIIFSYWHIMKAVAA 240
            :.:.: .|||    ..|.|..|.|.| .|...|..|.:|..|..:..|||.:..:|:.|.|..
  Rat   150 SFLSIHLGWN----SRNGTRGGNDTFKCKVQVNEVYGLVDGLVTFYLPLLIMCVTYYRIFKIA-- 208

  Fly   241 HEKAMREQAKKMN-VASLRNSEADKSKAIEIKLAKVALTTISLWFFAWTPY-TIINYAGIFESMH 303
                 |||||::| ::|.:.:...:.|| .:.||.|....|..||    || |...|.|:.....
  Rat   209 -----REQAKRINHISSWKAATIREHKA-TVTLAAVMGAFIICWF----PYFTAFVYRGLRGDDA 263

  Fly   304 LSPLSTICGSV--FAKANAVCNPIVYGLSHPKYKQVLREKMPC 344
            ::  ..:.|.|  ...||:..|||:|...:..::...::...|
  Rat   264 IN--EAVEGIVLWLGYANSALNPILYAALNRDFRTAYQQLFHC 304

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	80/295 (27%)
		TM helix 1	49..75	CDD:320207	7/24 (29%)
		TM helix 2	82..108	CDD:320207	7/25 (28%)
		TM helix 3	120..150	CDD:320207	9/29 (31%)
		TM helix 4	161..181	CDD:320207	3/19 (16%)
		TM helix 5	208..237	CDD:320207	9/28 (32%)
		TM helix 6	267..297	CDD:320207	11/30 (37%)
		TM helix 7	306..331	CDD:320207	8/26 (31%)
Hrh2	NP_001399940.1	7tmA_Histamine_H2R	19..298	CDD:320179	80/295 (27%)
		TM helix 1	20..46	CDD:320179	7/24 (29%)
		TM helix 2	53..80	CDD:320179	7/26 (27%)
		TM helix 3	91..121	CDD:320179	9/29 (31%)
		TM helix 4	133..153	CDD:320179	3/19 (16%)
		TM helix 5	178..208	CDD:320179	10/29 (34%)
		TM helix 6	226..256	CDD:320179	11/34 (32%)
		TM helix 7	266..291	CDD:320179	8/24 (33%)