DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh6 and LOC1269684

DIOPT Version :10

Sequence 1:NP_524368.5 Gene:Rh6 / 41889 FlyBaseID:FBgn0019940 Length:363 Species:Drosophila melanogaster
Sequence 2:XP_061501607.1 Gene:LOC1269684 / 1269684 VectorBaseID:AGAMI1_014185 Length:557 Species:Anopheles gambiae


Alignment Length:339 Identity:109/339 - (32%)
Similarity:184/339 - (54%) Gaps:38/339 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VDPYWYQW-PPLEPMWFG--IIGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSD 93
            ::|:|.:: ||.....:|  :..|::.:.|.:   ||.:|:::|...:.||||:|..|:|||.:|
Mosquito   145 INPFWLRFDPPSAGEHYGLAVFYFLMMLFGVI---GNALVVFMFYRYRSLRTPANYLVINLAVAD 206

  Fly    94 FMMMFTMFPPVVLNGFYGTWIMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCVIVKGMARKPL 158
            |::|... |..:.|..:....:|...|.:|.:.|::.|.|:|.::|:|:.|||.|:|     .||
Mosquito   207 FIIMMEA-PMFIYNSIHQGPALGSIGCTVYALMGAVGGTVAIATLTVISIDRYNVVV-----YPL 265

  Fly   159 TATAAVLRLMVVWTICGAWALMPLF--------GWNRYVPEGNMTACGTDYFAKDWWNRSYIIVY 215
            ....:..:|...:.|...||...||        |.:||..||.:|||..||..:.:..|.::.||
Mosquito   266 NPNRSTTKLKCYFLIAFTWAYGLLFASFPALEIGLSRYTAEGYLTACSFDYLDRTYKARVFMFVY 330

  Fly   216 SLWVYLTPLLTIIFSYWHIMKAVAAHEKAMREQAKKMNVASLRNSEADKSKAIEIKLAKVALTTI 280
            .::.:|.|...|.:.|..|:.||             :|..::::|:: |:|. |:|||.|.:..|
Mosquito   331 FVFAWLIPFAIISYCYARILIAV-------------INANAIQSSKS-KNKT-EVKLAGVVVGII 380

  Fly   281 SLWFFAWTPYTIINYAGIF-ESMHLSPLSTICGSVFAKANAVCNPIVYGLSHPKYKQVLREKMPC 344
            .|||.|||||.::...|:| ...:|:||:::..:||||..|..:|..|.::||:|:|:| |:|.|
Mosquito   381 GLWFAAWTPYAVVAMMGVFGYEQYLTPLNSMIPAVFAKIAASIDPYFYAMNHPRYRQML-ERMFC 444

  Fly   345 LACGKDDLTSDSRT 358
            .. |.|...|..:|
Mosquito   445 NR-GADQGNSQYQT 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh6NP_524368.5 7tmA_photoreceptors_insect 48..338 CDD:320207 97/300 (32%)
TM helix 1 49..75 CDD:320207 6/25 (24%)
TM helix 2 82..108 CDD:320207 9/25 (36%)
TM helix 3 120..150 CDD:320207 12/29 (41%)
TM helix 4 161..181 CDD:320207 4/19 (21%)
TM helix 5 208..237 CDD:320207 8/28 (29%)
TM helix 6 267..297 CDD:320207 14/29 (48%)
TM helix 7 306..331 CDD:320207 9/24 (38%)
LOC1269684XP_061501607.1 None

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