Protein Alignment Rh6 and tmtopn3

DIOPT Version :10

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Sequence 2: XP_002933418.2
• Gene: tmtopn3 / 100490931
• XenbaseID: XB-GENE-1018917
• Length: 403
• Species: Xenopus tropicalis
• Alignment Length: 327
• Identity: 89/327 - (27%)
• Similarity: 160/327 - (48%)
• Gaps: 21/327 - (6%)

  Fly    40 PPLEPMWFGIIGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMMMFTMFPPV 104
            |.|.|....::...:.::|::....|.:|:.:|...|.||:|.||.::|::.||.|:.....|..
 Frog    45 PNLSPTGHLLVAVFLGVIGSLGFFNNLVVLILFCQYKVLRSPINMLLMNISLSDLMVCILGTPFS 109

  Fly   105 VLNGFYGTWIMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCVIVKGMARKPLTATAAVLRLMV 169
            ......|.|::|...|..||...:|||.||:.|:.:::|:|||.:::...........|.|.::|
 Frog   110 FAASTQGHWLIGEIGCIWYGFVNTLFGTVSLVSLAVLSYERYCTMLRSTEADLTNYKKAWLGILV 174

  Fly   170 VWTICGAWALMPLFGWNRYVPEGNMTACGTDYFAKDWWNRSYIIVYSLWVYLTPLLTIIFSYWHI 234
            .|.....|.|.|||||::|.|||..|.|..::.::|..|.|||:...::....|...|::.|..:
 Frog   175 SWIYSLVWTLPPLFGWSKYGPEGPGTTCSVNWHSRDANNISYIVCLFIFCLALPFAVIVYCYGRL 239

  Fly   235 MKAVAAHEKAMREQAKKMNVASLRNSEADKSKAIEIKLAKVALTTISLWFFAWTPYTIINYAGIF 299
            :.|:        :|...::.:|        |:|.|.::..:.:..:..:...|.||.::.....|
 Frog   240 LFAI--------KQVSGVSKSS--------SRAREQRVLIMVIVMVVCFLLCWLPYGVMALVATF 288

  Fly   300 -ESMHLSPLSTICGSVFAKANAVCNPIVYGLSHPKYKQVLREKMPCLACGK-DDLTSDSRTQATA 362
             :...:||.::|..||.||::.|.|||:|...:   ||..|.....:.|.| ..::|:..:..|.
 Frog   289 GKPGIISPSASIIPSVLAKSSTVYNPIIYIFLN---KQFYRCFTALIHCNKHPQVSSNKGSSKTT 350

  Fly   363 EI 364
            :|
 Frog   351 KI 352

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	80/290 (28%)
		TM helix 1	49..75	CDD:320207	4/25 (16%)
		TM helix 2	82..108	CDD:320207	7/25 (28%)
		TM helix 3	120..150	CDD:320207	13/29 (45%)
		TM helix 4	161..181	CDD:320207	6/19 (32%)
		TM helix 5	208..237	CDD:320207	7/28 (25%)
		TM helix 6	267..297	CDD:320207	5/29 (17%)
		TM helix 7	306..331	CDD:320207	11/24 (46%)
tmtopn3	XP_002933418.2	7tmA_tmt_opsin	53..328	CDD:320214	81/293 (28%)
		TM helix 1	54..80	CDD:320214	4/25 (16%)
		TM helix 2	87..113	CDD:320214	7/25 (28%)
		TM helix 3	125..155	CDD:320214	13/29 (45%)
		TM helix 4	166..188	CDD:320214	7/21 (33%)
		TM helix 5	213..243	CDD:320214	7/29 (24%)
		TM helix 6	256..286	CDD:320214	5/29 (17%)
		TM helix 7	296..321	CDD:320214	11/24 (46%)