Protein Alignment Rh6 and opnva

DIOPT Version :10

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Sequence 2: NP_001265680.1
• Gene: opnva / 100489056
• XenbaseID: XB-GENE-29209071
• Length: 382
• Species: Xenopus tropicalis
• Alignment Length: 336
• Identity: 80/336 - (23%)
• Similarity: 152/336 - (45%)
• Gaps: 32/336 - (9%)

  Fly    39 WPP-------LEPMWFGIIGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMM 96
            |.|       :|...|.::..::.::.::|:|.||||:.:....|.||.|.|..:|||:.:||::
 Frog    17 WNPFTGPLKTIEAWNFHLLAALMFVVTSLSIAENFIVILVTAKFKQLRQPLNYIIVNLSVADFLV 81

  Fly    97 MFTMFPPVVLNGFYGTWIMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCVIVKGMARKPLTAT 161
            ........:.....|.:.:|.:.|.|.|...:.||.|::||::::|::||.||.:.:....|...
 Frog    82 SVIGGTISIATNSRGYFYLGSWACVLEGFAVTFFGIVALWSLSVLAFERYIVICRPLGNLRLQGK 146

  Fly   162 AAVLRLMVVWTICGAWALMPLFGWNRYVPEGNMTACGTDYFAKDWWNRSYIIVYSLWVYLTPLLT 226
            .:.|.::.||.....|.:.|..||:.|......|.|..::::.:..:.:|||.:....::.|||.
 Frog   147 HSALAIIFVWVFSFVWTIPPTMGWSSYTTSKIGTTCEPNWYSGEMRDHTYIITFLTTCFVFPLLV 211

  Fly   227 IIFSYWHIMKAVAAHEKAMREQAKKMNVASLRNSEADKSKAIEIKLAKVALTTISLWFFAWTPYT 291
            |..||..:|              :|:...|........::..|.::.::.:..|..:...||||.
 Frog   212 IFMSYGKLM--------------RKLRKVSDTQGRLGSTRKPEKEVTRMVVIMILAFLICWTPYA 262

  Fly   292 IINYAGIFESMH----LSPLSTICGSVFAKANAVCNPIVYGLSHPKYKQVLREKMPCLACGKDDL 352
            ..:   |..:.|    |.|......:.|||..::.|||:|...:.::::.|.:....    .|..
 Frog   263 AFS---ILITAHPTIDLDPRLAAIPAFFAKTASMYNPIIYVYMNKQFRRCLYQMFNI----NDPE 320

  Fly   353 TSDSRTQATAE 363
            ..:|....|:|
 Frog   321 AKESNLNPTSE 331

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	71/293 (24%)
		TM helix 1	49..75	CDD:320207	6/25 (24%)
		TM helix 2	82..108	CDD:320207	6/25 (24%)
		TM helix 3	120..150	CDD:320207	12/29 (41%)
		TM helix 4	161..181	CDD:320207	4/19 (21%)
		TM helix 5	208..237	CDD:320207	10/28 (36%)
		TM helix 6	267..297	CDD:320207	6/29 (21%)
		TM helix 7	306..331	CDD:320207	8/24 (33%)
opnva	NP_001265680.1	7tmA_VA_opsin	20..310	CDD:320210	73/306 (24%)
		TM helix 1	34..60	CDD:320210	6/25 (24%)
		TM helix 2	67..94	CDD:320210	6/26 (23%)
		TM helix 3	105..135	CDD:320210	12/29 (41%)
		TM helix 4	148..166	CDD:320210	4/17 (24%)
		TM helix 5	193..223	CDD:320210	10/43 (23%)
		TM helix 6	238..268	CDD:320210	7/32 (22%)
		TM helix 7	278..303	CDD:320210	8/24 (33%)