Protein Alignment Rh6 and tmtopsb

DIOPT Version :10

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Sequence 2: NP_001299608.2
• Gene: tmtopsb / 100334480
• ZFINID: ZDB-GENE-091118-50
• Length: 448
• Species: Danio rerio
• Alignment Length: 304
• Identity: 77/304 - (25%)
• Similarity: 140/304 - (46%)
• Gaps: 17/304 - (5%)

  Fly    42 LEPMWFGIIGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMMMFTMFPPVVL 106
            |.|....::...:..:||.....|.:|:.:|...|.||:|.|..:::::.||.::.....|....
Zfish    84 LSPTGHLVVAVCLGFIGTFGFLNNTLVLVLFCRYKVLRSPMNCLLISISVSDLLVCVLGTPFSFA 148

  Fly   107 NGFYGTWIMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCVIVKGMARKPLTATAAVLRLMVVW 171
            ....|.|::|...|..||...|..|.||:.|:.:::|:|||.::.............|:.:...|
Zfish   149 ASTQGRWLIGRAGCVWYGFINSFLGVVSLISLAVLSYERYCTMMGSTQADSTNYRKVVIGIAFSW 213

  Fly   172 TICGAWALMPLFGWNRYVPEGNMTACGTDYFAKDWWNRSYIIVYSLWVYLTPLLTIIFSYWHIMK 236
            .....|.|.|||||:.|.|||..|.|..::.|:...|.|||:...::..:.|.:.|::||..:::
Zfish   214 IYSMVWTLPPLFGWSCYGPEGPGTTCSVNWAARTPNNVSYIVCLFVFCLILPFIVIVYSYGRLLQ 278

  Fly   237 AVAAHEKAMREQAKKMNVASLRNSEADKSKAIEIKLAKVALTTISLWFFAWTPYTIINYAGIFES 301
            |:.        |..::|....|..|.        ::..:.:|.:..:...|.||.|:.....|..
Zfish   279 AIT--------QVSRINTVVSRKREQ--------RVLFMVVTMVVCYLLCWLPYGIMALLATFGH 327

  Fly   302 MHL-SPLSTICGSVFAKANAVCNPIVYGLSHPKYKQVLREKMPC 344
            ..| :|.::|..|:.||::.|.|||:|...:.::.:.....:.|
Zfish   328 PGLVTPAASIVPSLLAKSSTVINPIIYIFMNKQFCRCFHALIMC 371

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	74/290 (26%)
		TM helix 1	49..75	CDD:320207	5/25 (20%)
		TM helix 2	82..108	CDD:320207	4/25 (16%)
		TM helix 3	120..150	CDD:320207	12/29 (41%)
		TM helix 4	161..181	CDD:320207	4/19 (21%)
		TM helix 5	208..237	CDD:320207	8/28 (29%)
		TM helix 6	267..297	CDD:320207	5/29 (17%)
		TM helix 7	306..331	CDD:320207	10/24 (42%)
tmtopsb	NP_001299608.2	None