Protein Alignment Rh6 and taar12e

DIOPT Version :10

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Sequence 2: NP_001076563.1
• Gene: taar12e / 100034600
• ZFINID: ZDB-GENE-041014-51
• Length: 337
• Species: Danio rerio
• Alignment Length: 325
• Identity: 71/325 - (21%)
• Similarity: 138/325 - (42%)
• Gaps: 46/325 - (14%)

  Fly    48 GIIGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMMMFTMFPPVVLNGFYGT 112
            |:..|::.::.| ::.||.:::...:..|.|::|:::.|.:||..|.::...:.|..::....|.
Zfish    35 GLYVFLLLMILT-TVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGLLVMPYSMVRSVEGC 98

  Fly   113 WIMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCVIVKGMARKPLTATAAVLRLMVVWTICGAW 177
            |.:|..:|:::......|...|:..:.||:.|||..|.     .||.....|..:.|...|...|
Zfish    99 WYLGDVVCKVHSSLDMTFCISSLLHLGLISVDRYWAIC-----DPLRYRLRVTNITVTVFIVFIW 158

  Fly   178 ALMPLFGWNRYVPEGNMTACGTDYFAKD---------WWNRSYIIVYSLWVYLTPLLTIIFSYWH 233
            ...  |.::.||....:...|.:.|...         ::|:.:.::..:.|:..|...:...|..
Zfish   159 LFS--FVYSFYVVFSGVNTVGLETFIMQVYCVGSCVLYFNKQWGLICPILVFFLPGAIMSSLYMK 221

  Fly   234 IMKAVAAHEKAMREQAKKMNVASLRN-SEADKSKAIEIKLAKVALTTISLWFFAWTPYTIINY-- 295
            |......|.|.|.|:.    ...|:: |.|.:    |.|.||:....:.::.|.|.|:..:|.
Zfish   222 IFHVARKHAKVMSERV----TGGLKSQSSAQR----ERKAAKILAIVMGVFLFCWLPFFTVNALD 278

  Fly   296 --------AGIFESMHLSPLSTICGSVFAKANAVCNPIVYGLSHPKYKQVLREKMPCLACGKDDL 352
                    |.||:::          ..||..|:.|||::||..:|.:::..:..:....||..:|
Zfish   279 PFFNFFTPADIFDAV----------IWFAYLNSTCNPLIYGFFYPCFQKAFKILIFTYICGVRNL 333

  Fly   353  352
            Zfish   334  333

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	68/309 (22%)
		TM helix 1	49..75	CDD:320207	4/25 (16%)
		TM helix 2	82..108	CDD:320207	5/25 (20%)
		TM helix 3	120..150	CDD:320207	8/29 (28%)
		TM helix 4	161..181	CDD:320207	4/19 (21%)
		TM helix 5	208..237	CDD:320207	5/28 (18%)
		TM helix 6	267..297	CDD:320207	8/39 (21%)
		TM helix 7	306..331	CDD:320207	8/24 (33%)
taar12e	NP_001076563.1	7tm_GPCRs	34..319	CDD:475119	68/309 (22%)
		TM helix 1	36..60	CDD:410628	4/24 (17%)
		TM helix 2	69..91	CDD:410628	5/21 (24%)
		TM helix 3	107..129	CDD:410628	4/21 (19%)
		TM helix 4	152..168	CDD:410628	3/17 (18%)
		TM helix 5	197..220	CDD:410628	2/22 (9%)
		TM helix 6	254..276	CDD:410628	5/21 (24%)
		TM helix 7	287..312	CDD:410628	11/34 (32%)