DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rh6 and opn7d

DIOPT Version :10

Sequence 1:NP_524368.5 Gene:Rh6 / 41889 FlyBaseID:FBgn0019940 Length:363 Species:Drosophila melanogaster
Sequence 2:XP_073765023.1 Gene:opn7d / 100000387 ZFINID:ZDB-GENE-081105-91 Length:431 Species:Danio rerio


Alignment Length:351 Identity:88/351 - (25%)
Similarity:156/351 - (44%) Gaps:60/351 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 IGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMMMFTMFPPVVLNGFYGTWI 114
            :|.:.:|...:||.||.:::.:....:....|:..|:|||:|||..|..::||..:.:.|...|:
Zfish    50 MGSLYSIFCILSLLGNGVLLLVAYRKRSSLKPAEFFIVNLSFSDLGMTVSLFPLAIPSAFAHKWL 114

  Fly   115 MGPFLCELYGMFGSLFGCVSIWSMTLI-----------------AYDRYCVIVKGMARKPLTATA 162
            .|...|..|.:.|.|||..|:.::|.:                 :|...|:::.|          
Zfish   115 FGELTCLCYAVCGVLFGLSSLTNLTALSSVCCLKVCFPNYGNKFSYSHACLMIVG---------- 169

  Fly   163 AVLRLMVVWTICGAWALMPLFGWNRYVPEGNMTACGTDYFA--KDWWNRSYIIVYSLWVYLTPLL 225
                   ||.....:|:.||..|..|.||...|||..|::|  :|..:.||||...|..|..||.
Zfish   170 -------VWCYAMVFAVGPLANWGHYGPEPYGTACCIDWYAPGQDALSMSYIICLFLLCYALPLG 227

  Fly   226 TIIFSYWHIMKAVAAHEKAMREQAKKMNVASLRNSEADKSKAIEIKLAKVALTTISLWFFAWTPY 290
            .|:.||..|:..|....:|:::..          |...|:....|.:.|:::.....:..||:||
Zfish   228 IILLSYILILITVRGSRQAVQQHV----------SPQTKTTNAHILIVKLSVAVCIGFLTAWSPY 282

  Fly   291 TII-NYAGIFESMHLSPLSTICGSVFAKANAVCNPIVYGLSHPKYKQVL-------REKM---PC 344
            .:: .:|...|..::.|::....::|||::.:.||:||.:..|.:::.|       |.::   ||
Zfish   283 AVVAMWAAFGEPDNVPPMAFALAAIFAKSSTIYNPVVYLVFKPNFRKSLSRDTAQIRRRICSSPC 347

  Fly   345 LAC---GKDDLTSDSRTQATAEISES 367
            ...   |:.||...:..:...:.|.|
Zfish   348 KGSPVPGEKDLQRQTSLRCNKDASNS 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh6NP_524368.5 7tmA_photoreceptors_insect 48..338 CDD:320207 79/307 (26%)
TM helix 1 49..75 CDD:320207 6/24 (25%)
TM helix 2 82..108 CDD:320207 10/25 (40%)
TM helix 3 120..150 CDD:320207 10/46 (22%)
TM helix 4 161..181 CDD:320207 3/19 (16%)
TM helix 5 208..237 CDD:320207 12/28 (43%)
TM helix 6 267..297 CDD:320207 6/30 (20%)
TM helix 7 306..331 CDD:320207 8/24 (33%)
opn7dXP_073765023.1 None

Return to query results.
Submit another query.